CI01000340_01422577_01422959


Basic Information

Item Value
gene id CI01000340_01422577_01422959
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 1422463 ~ 1422959 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_01422577_01422959.mRNA
GAGAAGAGATCTCGTACTGAAACCGTTCAGAAGCCTCAAAGTGCACAGCCCTCCAGGGAAAAACCAAAGAAGTCTCTTGGCAGCCTTTTCAAAACCAGTGTGGCATCTTCTGCTTTGCCTGTGCAACTTGAAGATGTCGCGGAGGCAGAGTTAAATGGTTACCTGTTGACCCCTGTCATTGACGGAGAGGACGATCCCTTGGCCTGGTGGAAGCCACTAGTGCCCCCTCAGAGCATCTGTTTAGCACTGGAGGTAATACACCTGCACCCGCTCATCCTTGAAACTAGCAAAAGTGGATATACTGGTTTTCCTATAGCAAAAAACCTGTGAGCTACTGAGAACCATACCGTAGAATCACTATGGCTGGCAGTGCCATACTCATTGTGCACTTTAGTATGGTGTGTTTATGTATCATGACTATTACAGTGACAATTATCTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_01422577_01422959.mRNA True 444 mRNA 0.46 2 1422463 1422959

Neighbor

gene id symbol gene type direction distance location
CI01000340_01400601_01408156 LRRC8C coding downstream 14307 1399456 ~ 1408156 (-)
CI01000340_01385672_01396802 LRRC8DB, LRRC8D coding downstream 23667 1384749 ~ 1398796 (-)
CI01000340_01375418_01382944 ZNF326 coding downstream 39519 1375042 ~ 1382944 (-)
CI01000340_01356603_01359427 NA coding downstream 63036 1356460 ~ 1359427 (-)
CI01000340_01339075_01340999 NA coding downstream 80976 1338340 ~ 1341487 (-)
CI01000340_01436981_01473643 PKN2 coding upstream 13430 1436389 ~ 1473643 (-)
CI01000340_01610308_01614177 NA coding upstream 187271 1610230 ~ 1614911 (-)
CI01000340_01620065_01624298 NA coding upstream 196302 1619261 ~ 1624726 (-)
CI01000340_01785945_01793672 LMO4, LMO4B coding upstream 362868 1785827 ~ 1793954 (-)
CI01000340_01839512_01846883 NA coding upstream 415318 1838277 ~ 1846893 (-)
G486289 NA non-coding downstream 135532 1286635 ~ 1286931 (-)
G486267 NA non-coding downstream 170499 1250482 ~ 1251964 (-)
G486153 NA non-coding downstream 199008 1213049 ~ 1223455 (-)
G486110 NA non-coding downstream 272146 1150092 ~ 1150317 (-)
G486035 NA non-coding downstream 330923 1091220 ~ 1091540 (-)
G486276 NA non-coding upstream 9485 1432444 ~ 1432671 (-)
G486348 NA non-coding upstream 71480 1494439 ~ 1494642 (-)
G486406 NA non-coding upstream 134314 1557273 ~ 1557510 (-)
G487872 NA non-coding upstream 258401 1681360 ~ 1682396 (-)
G487878 NA non-coding upstream 309084 1732043 ~ 1732280 (-)
CI01000340_00787534_00791061 NA other downstream 631054 786551 ~ 791409 (-)
G485786 NA other downstream 1096747 325334 ~ 325716 (-)
CI01000340_00062787_00080635 NA other downstream 1340368 62780 ~ 82095 (-)
G487884 NA other upstream 472842 1895801 ~ 1902272 (-)
G488782 NA other upstream 2582846 4005805 ~ 4006448 (-)
G488862 NA other upstream 3084237 4507196 ~ 4518120 (-)
CI01000340_04598932_04627160 NA other upstream 3177261 4598714 ~ 4627447 (-)
CI01000340_05321995_05329778 ATG4C other upstream 3897794 5320753 ~ 5330215 (-)

Expression


Co-expression Network