CI01000340_03670820_03675367


Basic Information

Item Value
gene id CI01000340_03670820_03675367
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 3670713 ~ 3675367 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_03670820_03675367.mRNA
GTATCTCTGCTAACTCAGATTCTCCTGTTTAATGAATTGCAGACATTAATCAAGTTATTATGGCAGACAATTTCAACGTTATGTTACAGTGTCTTCACACACAACGCCTCAACATGCGACCCAAGCGTCCAAATTTCACTCGTGTCAACAAAGGAAAAGAACATGTTACTCACTTTAGAACAGGAGGCAAAACGGCAGCGTGTTCAGATGCCCAGTCCAGAGCGCATCAAAAAGGTTGAAAGGTCAATGATGCGTCTTGACACTATTGTGAAAGAACGTGAGGATGCTCTGCGCTTACTGCAGACGGGACAAGAGAAAGCTAGACCAGGCGCATGGCGAAGAAATGTCTTTGGCAAAACCTTCTGGTACCGCTTCAGGGAACACCCAATCCCCTGGCACCTTAATTCAAGATACAAAAGGACACGATTCTTTGAACCATCACATGTCGCCCCTTACACAAGGTTAAGCCTTGAAAAATACCTGAGGAGTAAGATGCGGAAAGAAAAAAAAGAAAAGAGAAACCAAAAAAAGCTTGCAGCGATGTTTCCAAAAAAGACTGCACATGCATGAGACCATTGAAAAGACTTTTTGCATTTAATGTCTTTTCAACAAAATACTTTTTTCATTTCTCCATAAGCTTTGGAGTTTCAGAATATGTTGTACAGTCAAATAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_03670820_03675367.mRNA True 677 mRNA 0.41 6 3670713 3675367

Neighbor

gene id symbol gene type direction distance location
CI01000340_03622734_03659141 TMEM131 coding downstream 11557 3621970 ~ 3659156 (-)
CI01000340_03607549_03614126 BIVM coding downstream 56587 3607130 ~ 3614126 (-)
CI01000340_03561521_03596697 NDK7, NME7 coding downstream 74016 3561479 ~ 3596697 (-)
CI01000340_03528645_03535760 DPT coding downstream 134753 3528300 ~ 3535960 (-)
CI01000340_03500913_03512175 ZBTB11 coding downstream 158018 3500331 ~ 3512695 (-)
CI01000340_03713291_03747080 PEX5L, PEX5LA coding upstream 37386 3712753 ~ 3747272 (-)
CI01000340_03750211_03772917 NA coding upstream 74568 3749935 ~ 3773916 (-)
CI01000340_04086574_04090310 NA coding upstream 410863 4086230 ~ 4090310 (-)
CI01000340_04277249_04284722 NA coding upstream 601772 4277139 ~ 4285407 (-)
CI01000340_04362537_04371224 LURAP1 coding upstream 687008 4362375 ~ 4371224 (-)
G488582 NA non-coding downstream 49081 3618019 ~ 3621632 (-)
G488664 NA non-coding downstream 126117 3544379 ~ 3544596 (-)
G488663 NA non-coding downstream 126663 3543462 ~ 3544050 (-)
G488651 NA non-coding downstream 145113 3525348 ~ 3525600 (-)
G488649 NA non-coding downstream 149117 3521372 ~ 3521596 (-)
G488588 NA non-coding upstream 187785 3863152 ~ 3863573 (-)
G488568 NA non-coding upstream 192437 3867804 ~ 3869876 (-)
G488748 NA non-coding upstream 196317 3871684 ~ 3872011 (-)
G488750 NA non-coding upstream 199091 3874458 ~ 3874738 (-)
G488593 NA non-coding upstream 217402 3892769 ~ 3893172 (-)
G487884 NA other downstream 1768441 1895801 ~ 1902272 (-)
CI01000340_00787534_00791061 NA other downstream 2879304 786551 ~ 791409 (-)
G485786 NA other downstream 3344997 325334 ~ 325716 (-)
CI01000340_00062787_00080635 NA other downstream 3588618 62780 ~ 82095 (-)
G488782 NA other upstream 330438 4005805 ~ 4006448 (-)
G488862 NA other upstream 831829 4507196 ~ 4518120 (-)
CI01000340_04598932_04627160 NA other upstream 924853 4598714 ~ 4627447 (-)
CI01000340_05321995_05329778 ATG4C other upstream 1645386 5320753 ~ 5330215 (-)
CI01000340_06095704_06194498 MAST2 other upstream 2507923 6095704 ~ 6194501 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_032907 mrpl47 coding NC_007117.7 CM002890.2 29397554 ~ 29402578 (-)