CI01000340_04564752_04566790


Basic Information

Item Value
gene id CI01000340_04564752_04566790
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 4564611 ~ 4567156 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_04564752_04566790.mRNA
CTATAAATGGTAGCCTTTGATAAGTACCGCCTTATTCATTTCAGGAGCAATTTTCTTAAAAGAACATGCATTAAAACTTTAGATTACTGAGTAGAGTAAGTCGGAGAATGTATATTAAAAATGGCTTCATAAATCTTCAAAATGCCCGCCAAATGGACACAGACAGGATCAAAGCAGGGAAATAGATTCTGCATAAGTAATAGCAGCCGCAAAACCGCCAATTCCTCAGTAGTGTTATTGCAGAGTGATATACGATACCGGAGGAACACTGCAAATGTGGTGGCACAGATGGCAGCAGTTGGCCGAGCTGGTGCCGTCTGTGAACGGGGTTCAGCAACATTACCGGCAGCGATGAACATTAGGGCCAAGAGGGGCAGTGAATGGCCTGCCCCAGATATTAATAGAGGCATAAATACATTGCAGTTCAACCTGCTCCACCTGTTTCTCTGGGGCCTAGACTTTGCTCCTCTTTGCCCGAGTCAAAATACAGTGTGACATGCATGTTGAATTATTTATGGACACACAGTCAGTCACGACTCTATACTAAACTAAAATGCTATTGTCTTCAGAAACTGACGCTGTGATCAGCAAAATTTCAGCTTGCACACCAGTTTAAAAATAGTTTGGTTCATAATTGATCCCCCTGTGAGCATTGGGTCAGATATGCTCTGATAACATTAAATTGTATTAAAACCAGTGACTGTTTACATAATATTATTAGTTCGTATTATTTAAGCTGAGCATTTAATGTAATGAACACTGTCGTCACACACCATATATTTATGATCTTAGCAAGGACAAAGCTGGAAGGTCATAGGCACTGATGTATGGAAATATTCTTATTTGAGTCTGGATACTCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_04564752_04566790.mRNA True 861 mRNA 0.40 3 4564611 4567156

Neighbor

gene id symbol gene type direction distance location
CI01000340_04399692_04401164 NA coding upstream 163151 4399419 ~ 4401496 (+)
CI01000340_04387653_04393950 NA coding upstream 170492 4387653 ~ 4394119 (+)
CI01000340_04374493_04379773 TTC22 coding upstream 184126 4374316 ~ 4380485 (+)
CI01000340_04310811_04341754 WWC3 coding upstream 222857 4310811 ~ 4341754 (+)
CI01000340_04273797_04274531 CLDN34, CLDN34A coding upstream 290078 4273597 ~ 4274533 (+)
CI01000340_04660938_04668996 NA coding downstream 92428 4659584 ~ 4669322 (+)
CI01000340_04809014_04832590 JAK1 coding downstream 241858 4809014 ~ 4832590 (+)
CI01000340_05105114_05112407 NA coding downstream 537203 5104359 ~ 5112713 (+)
CI01000340_05165855_05175759 NA coding downstream 598090 5165246 ~ 5176372 (+)
CI01000340_05338225_05385755 DOCK7 coding downstream 771069 5338225 ~ 5385755 (+)
G487326 NA non-coding upstream 30034 4533734 ~ 4534577 (+)
G487323 NA non-coding upstream 60410 4503935 ~ 4504201 (+)
G487322 NA non-coding upstream 61397 4502546 ~ 4503214 (+)
G487289 NA non-coding upstream 72641 4440903 ~ 4491970 (+)
G487282 NA non-coding upstream 131964 4432099 ~ 4432647 (+)
G487444 NA non-coding downstream 152106 4719262 ~ 4719516 (+)
G487445 NA non-coding downstream 155311 4722467 ~ 4722672 (+)
G487446 NA non-coding downstream 159949 4727105 ~ 4727336 (+)
G487447 NA non-coding downstream 160548 4727704 ~ 4728019 (+)
G487133 NA other upstream 582066 3973915 ~ 3982545 (+)
CI01000340_02930635_02933799 LSM2 other upstream 1632811 2930635 ~ 2933935 (+)
CI01000340_00312480_00313262 NA other upstream 4251366 312212 ~ 313534 (+)
G485427 NA other upstream 4396977 163286 ~ 167634 (+)
G489634 NA other downstream 2127065 6694221 ~ 6700788 (+)
G490645 NA other downstream 4471656 9038812 ~ 9043101 (+)
G490826 NA other downstream 4558028 9125184 ~ 9131397 (+)
G490839 NA other downstream 4667817 9234973 ~ 9237559 (+)

Expression


Co-expression Network