CI01000340_05875022_05877021


Basic Information

Item Value
gene id CI01000340_05875022_05877021
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 5874587 ~ 5877298 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_05875022_05877021.mRNA
CTATATGTGGACTAGTGCCAATGCTGCAGAAAAGCCCAACGTCCCGATTTCAGGTCACTGTGTCCCCAAATTTGTGCTATCACTGTCCTGCACCATCAACCGCCTGTTCATCCCTCGCTTCATGGGGCTGTTTTTGCTTTCTCTGACTCCGTTTTATATCTTACCACAGACTGCTAGAATTCGTTTCAAGTAAATTTGTACTTTTTATTAATGGACCAAATCTAGAACTGCGCAATAACGGCCTCTGCCCTACATATGGTACTGTTGGAGTTTTAACCCTTACAAGAAACTAATGTCACTGAGCTCTCAGGATTTAACCCAAGGACTTTCCAAGTGAGTTAGCACTCAGGATTCAAACGACGAACTTACATCCAGGTCATTTTTAAATAAACATCAAACACAGAAAACCCTCTGAGCTCATGTAAATAACAAATCATGAGCTCTGACAGCTTCCAGTACCGTGCACTGTTCGAGTACAAACAGGAGAGGGGTGACGATATCTCCCTGCAGCCTGGCGATCTCCTCACGGTCAGTAAGATGGCACTGCTGACGTCTGATTACCAGGAGGGTGACGAGAAGTGCCCAAAGGGCTGGCTGCATGGCACCAATGAACGCACTAAGGAGAAGGGCAACTTCCCTGGCACCTTTGTGGAGTATGTTGGGGTCATGAGGACGAGCCTTACTTCAGGGAAGCCCTGGCCGAGACCTGTACCGCCAACACCTGTAGGGCCTCAGCCCCCGGGGGCCTCTGCTTCAGAGGGCGCAGAGATGGTGATAAACAGCGTAGCAAAGCCATTCCTTAGTGTCGGGAGAGGCAAAAACATGCAGTTCTGTTGAATAATTGATCACTGGTGCATTGGATGGCTGACAGTCAGCCAATCATTAGACTCACCCTGTGCCAAGAGATCCTTGTGGAACACTGACGAAACACTTACCCTGATTGAAGAGAGTTTTATGAGCCTAGCAAATTGTCAAGTTTATCGAATCGATAAAATTGGTCTTTTTTTTTTTAATCATGCATTATAGAGCTTTTGGAACAGTGAATATGAAACAAAAGTTCAGAACATTGACATAGACTTTGATCTTGTTACATTGATGTATTATTTTCATATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_05875022_05877021.mRNA True 1114 mRNA 0.45 2 5874587 5877298

Neighbor

gene id symbol gene type direction distance location
CI01000340_05781697_05792066 POMGNT1, MGC81332, POMGNT1.S coding upstream 81909 5780852 ~ 5792678 (+)
CI01000340_05697468_05705929 GHRHRB coding upstream 167687 5697317 ~ 5706900 (+)
CI01000340_05646434_05651598 NA coding upstream 222242 5645637 ~ 5652345 (+)
CI01000340_05433329_05446428 KANK4 coding upstream 427806 5433329 ~ 5446781 (+)
CI01000340_05338225_05385755 DOCK7 coding upstream 488832 5338225 ~ 5385755 (+)
CI01000340_05942559_05948192 NA coding downstream 64678 5941976 ~ 5949268 (+)
CI01000340_05967007_05972445 NA coding downstream 89418 5966716 ~ 5972589 (+)
CI01000340_06033435_06039832 PIK3R3B, PIK3R3 coding downstream 154959 6032257 ~ 6039849 (+)
CI01000340_06227847_06235507 GPBP1L1 coding downstream 350549 6227847 ~ 6235903 (+)
CI01000340_06237715_06245533 NA coding downstream 360417 6237715 ~ 6245762 (+)
G489235 NA non-coding upstream 44594 5829783 ~ 5829993 (+)
G489237 NA non-coding upstream 45047 5829314 ~ 5829540 (+)
G487814 NA non-coding upstream 103701 5764823 ~ 5770886 (+)
G487812 NA non-coding upstream 111774 5762580 ~ 5762813 (+)
G487808 NA non-coding upstream 117981 5756384 ~ 5756606 (+)
G489228 NA non-coding downstream 8716 5886014 ~ 5906995 (+)
G489230 NA non-coding downstream 120629 5997927 ~ 6000707 (+)
G489229 NA non-coding downstream 123653 6000951 ~ 6010551 (+)
G489271 NA non-coding downstream 196443 6073741 ~ 6073943 (+)
G489274 NA non-coding downstream 199713 6077011 ~ 6077243 (+)
CI01000340_04660938_04668996 NA other upstream 1209402 4659584 ~ 4669322 (+)
CI01000340_04399692_04401164 NA other upstream 1473091 4399419 ~ 4401496 (+)
G487133 NA other upstream 1892042 3973915 ~ 3982545 (+)
CI01000340_02930635_02933799 LSM2 other upstream 2942787 2930635 ~ 2933935 (+)
CI01000340_00312480_00313262 NA other upstream 5561342 312212 ~ 313534 (+)
G489634 NA other downstream 816923 6694221 ~ 6700788 (+)
G490645 NA other downstream 3161514 9038812 ~ 9043101 (+)
G490826 NA other downstream 3247886 9125184 ~ 9131397 (+)
G490839 NA other downstream 3357675 9234973 ~ 9237559 (+)
G490896 NA other downstream 3954175 9831473 ~ 9845052 (+)

Expression


Co-expression Network