CI01000340_06068195_06072250


Basic Information

Item Value
gene id CI01000340_06068195_06072250
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 6067057 ~ 6072288 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_06068195_06072250.mRNA
ATTTTCTGATGATTTCCACAGACGTTTGTCCCTCATAAATGCAGTCCTTTACTCTGAAGTATCTGTGGTATGCTGCAGCTCTGGCTCTGCTGTGTGTTACAGTTCCTGCTCTTCCCAGGAGAGCGACCCAGAACCCTGAGACCTGTCACAGAGCGGGCCAGGAATGGCTTACTTTACTGCCATCAGTGCCAGTGTGTGGACCCTCACAAGCCTGCACAGCAGCAGGGCATCTGCAGACTGGTGACGGGAGGGATAAATCTCATTTAATAATACAACCGCTCTCTCTGTCGGTGGGAGTCACGGTACGTTGCCAGTGTAAGCTTCATGGTGAATACCTCTACATCACTCTTGTCAACGTAGTCCATAGCAACAACAACAACTTATCTTGCATTTATCTAGTGGTTATTTTGGGGGGGGATAAAAAAAACAGCCTGTTCCCTTATTTCTCTAGTTTTTCCCATGTGAGTTGTGATAACGCTGGAACGGTGCCACCGCTAAGCCCCATGGCTCCAGCAGCTTGGCTACCTGTGCATCTGATGGAGAAATAATTACCTTTTACTTAATTCTCCTTTATGGATTTCTCGGGCCTCGTGCATGCTCTCCTGAAGATCCCTAATTTGTGGTTAACCCAAAAGTGGAAGGTGGGGTATGAATCAGTACAACAAGAGATATGGCTTCCTCTGAAGTGTAGCCAACTCTGAGTCAAGCCACCTTATTTCATGGCTCAAGTAAGGGGCTTTTAAATCCATTATATTCAGCTCCATGTACAGCTATTTATATTCCAAACTAGTTAAAATGGGTCACAGAGTGGTATTGTTAGTAGTGTAAGTTTTAGGAAATGTGTTTCTCTAAAATTAGGTTGAGACAGCACCATATGGACCCTTATCACAGTTCTGGCTGAACTTCTGTAGAGGTACATGGGAAAGGGTGACCATAGCAAATATAATTTTTGCCTTCCCATTTGCTCTTACTGCAAAAAAATCCACTATTGTGTTTCTGTGACTTTACAAAAGAGGGGACAACAATGATTGAGAGATGGATTAAGGTAAAAGGAGAAAAAGAGAAAAATGTATTCGAAACCCCATCTGAGCAGCATAGTTAATTACTTTATTAATGCTAGGTTGATGTAACACAAAATTAATTATGAAAATGTATTATTTTTAAGTGAAATATATTTTATAAATTAGATATACAGTATTAATTATTGTGGCAAAGTGTCATCTAGTCTGTGAATAGGGTCCAAAGCCCTTACTTCTTTTGATATACAGACAACAGCTTTAGTCATTTTATGTGCTGTTAGTGACCTTACAAAATAATTCCACTCTTTCAACAATTCATAAAGCGCCAATTAAAGGTGACAATGTGTTGAAACGGCAGATTTTGAGTCTGTCCTTTGAAAGGAATTTTTATGAACAGTGAGTCATGCAATGAATCGGAAACCTGGTAATGAGTTTTTTTATGTGGTATGATTTATGAGAGGCAGTTTGTGAAATTCATGGATATGATCAACCAAAGAGGCATAATTGAGAACACATTGTCTTATAATGTGACACAATAGACGTGCAATCCGGCCACAATAGCATGCATGAGTGTATTGTGTGTCTGCACTCTGCACAGAGCTAAATTCCCAATTACTCTGGAGGTCTTTGGGATTTTCGCCAGAGGAGACAGTATTAAAACAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_06068195_06072250.mRNA True 1686 mRNA 0.40 4 6067057 6072288

Neighbor

gene id symbol gene type direction distance location
CI01000340_05796381_05802803 NA coding downstream 264254 5796381 ~ 5802803 (-)
CI01000340_05778950_05780358 NA coding downstream 286628 5778861 ~ 5780429 (-)
CI01000340_05739446_05740109 NA coding downstream 324924 5738981 ~ 5742133 (-)
CI01000340_05717260_05723962 ADCYAP1R1B coding downstream 343095 5716203 ~ 5723962 (-)
CI01000340_05576979_05643605 NA coding downstream 423452 5576979 ~ 5643605 (-)
CI01000340_06095704_06194498 MAST2 coding upstream 23416 6095704 ~ 6194501 (-)
CI01000340_06222356_06224576 TMEM69 coding upstream 149756 6222044 ~ 6224576 (-)
CI01000340_06248419_06255089 NASP coding upstream 175112 6247400 ~ 6255165 (-)
CI01000340_06256040_06258336 AKR1A1B, AKR1A1 coding upstream 183676 6255964 ~ 6258336 (-)
CI01000340_06260156_06263609 PRPF38A coding upstream 187797 6260085 ~ 6263880 (-)
G489461 NA non-coding downstream 123055 5942457 ~ 5944002 (-)
G489486 NA non-coding downstream 156635 5908415 ~ 5910422 (-)
G489472 NA non-coding downstream 181633 5883391 ~ 5885424 (-)
G489463 NA non-coding downstream 191757 5874001 ~ 5875300 (-)
G489458 NA non-coding downstream 212511 5854314 ~ 5854546 (-)
G489523 NA non-coding upstream 76457 6148745 ~ 6167032 (-)
G489618 NA non-coding upstream 343824 6416112 ~ 6416471 (-)
G489619 NA non-coding upstream 344897 6417185 ~ 6417977 (-)
G489622 NA non-coding upstream 347962 6420250 ~ 6420536 (-)
G489623 NA non-coding upstream 352415 6424703 ~ 6424998 (-)
CI01000340_05321995_05329778 ATG4C other downstream 741913 5320753 ~ 5330215 (-)
CI01000340_04598932_04627160 NA other downstream 1407996 4598714 ~ 4627447 (-)
G488862 NA other downstream 1470796 4507196 ~ 4518120 (-)
G488782 NA other downstream 2060609 4005805 ~ 4006448 (-)
G487884 NA other downstream 4164785 1895801 ~ 1902272 (-)
G489511 NA other upstream 248169 6320457 ~ 6327372 (-)
G491712 NA other upstream 2726913 8799201 ~ 8799577 (-)
CI01000340_10025958_10028902 SRSF3 other upstream 3949604 10025656 ~ 10029589 (-)
CI01000340_10357202_10357606 NA other upstream 4284896 10356758 ~ 10359856 (-)

Expression


Co-expression Network