CI01000340_06326491_06326891


Basic Information

Item Value
gene id CI01000340_06326491_06326891
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 6326491 ~ 6327145 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_06326491_06326891.mRNA
AGCACAAAGTCATTGATGATCCAAAAACGTCTTCAGAGAGCTGGAAGGTCCTTGTGGCTGTTCTGGTGTCAGCTATCACCCTCTCTGTTCTTATCGCTCTGATGGCCAAATTCAAAGTTGTGCACAAGTATCTGGCAAGCTACAGACACTCCAGGCTCAGCGAAGTAGATGCCACGAGTCAGTGTGACCCTGCAAACTTTGAGGTGGGATTCTCGAGCCACGGTGGCCCAGGGACTCGTGCAGCTGCATCTACTAATGACATCGAAGAGGATGACGATGGGTTTATTGAAGATAACTATATACAAGCAAGTGAGAGTGAGAGAGCCACAAAAGCAGCAGCAGCACTGACTGATGATAATGATGATGATGAAGAGGAGGAGATTGAATTTAGTATTGGTTAGGCTCATTAAGTCTAATCTTATTTGGTAAAATTTATAATAACTTGCATTAATAAGTTACTAACAAACATTCAATACTTCATAATAATTAGTTAAACTATTCACTGAGAAAAATGAATATACAGTGTCCCCAGCCTATCTAATGAAATGAAATTCATACATTTTATATAGATGTCTAAATAGAATCTTAGGACACTTTATGAAAGTATTTGAAAATATATAAATCAAAGTTTAATTACATTTGAATGTAGACCTTA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_06326491_06326891.mRNA True 655 mRNA 0.38 1 6326491 6327145

Neighbor

gene id symbol gene type direction distance location
CI01000340_06264637_06276320 ORC1 coding upstream 49688 6264637 ~ 6276803 (+)
CI01000340_06237715_06245533 NA coding upstream 80729 6237715 ~ 6245762 (+)
CI01000340_06227847_06235507 GPBP1L1 coding upstream 90588 6227847 ~ 6235903 (+)
CI01000340_06033435_06039832 PIK3R3B, PIK3R3 coding upstream 286642 6032257 ~ 6039849 (+)
CI01000340_05967007_05972445 NA coding upstream 353902 5966716 ~ 5972589 (+)
CI01000340_06327907_06340628 AP1M3 coding downstream 341 6327486 ~ 6340644 (+)
CI01000340_06538378_06617710 LRP8 coding downstream 211233 6538378 ~ 6617947 (+)
CI01000340_06656187_06669677 NA coding downstream 328877 6656022 ~ 6671469 (+)
CI01000340_06677894_06691556 IL12RB2 coding downstream 350749 6677894 ~ 6691569 (+)
CI01000340_06702811_06703207 NA coding downstream 375666 6702811 ~ 6703903 (+)
G489379 NA non-coding upstream 41183 6270966 ~ 6285308 (+)
G489333 NA non-coding upstream 151095 6175013 ~ 6175396 (+)
G489331 NA non-coding upstream 154555 6171635 ~ 6171936 (+)
G489330 NA non-coding upstream 155529 6170732 ~ 6170962 (+)
G489329 NA non-coding upstream 155798 6170437 ~ 6170693 (+)
G489651 NA non-coding downstream 161064 6488209 ~ 6525984 (+)
G489634 NA non-coding downstream 367076 6694221 ~ 6700788 (+)
G489668 NA non-coding downstream 463374 6790519 ~ 6790812 (+)
G489640 NA non-coding downstream 464445 6791590 ~ 6799334 (+)
CI01000340_04660938_04668996 NA other upstream 1661306 4659584 ~ 4669322 (+)
CI01000340_04399692_04401164 NA other upstream 1924995 4399419 ~ 4401496 (+)
G487133 NA other upstream 2343946 3973915 ~ 3982545 (+)
CI01000340_02930635_02933799 LSM2 other upstream 3394691 2930635 ~ 2933935 (+)
CI01000340_00312480_00313262 NA other upstream 6013246 312212 ~ 313534 (+)
G490645 NA other downstream 2711667 9038812 ~ 9043101 (+)
G490826 NA other downstream 2798039 9125184 ~ 9131397 (+)
G490839 NA other downstream 2907828 9234973 ~ 9237559 (+)
G490896 NA other downstream 3504328 9831473 ~ 9845052 (+)

Expression


Co-expression Network