CI01000340_07347497_07355645



Basic Information


Item Value
gene id CI01000340_07347497_07355645
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 7346820 ~ 7356850 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000340_07347497_07355645.mRNA
AGGCTACCACTCAGACTATTGATCGTGTGTGTGTTTGAGAGAAGGCAGTGAACTGTGTAATGTTTTCTTTTTTTCTCTGTAACTCAAAGACTATTCGCCTCCAGATTAGGACCACTGTAGCCTGCCGGGATTCAAAATTGAACAGAAAAACCCTTCTAACAAAAGTATGGTGAATCACTCCCTATCAGATCATATTTTCAATCTTTATATGCATCGGACTTTCGTTCCCCTGAAGTCTTTTTCAGGTAAACCTCCTTTTTGTTGCTCCTACTTTACGATTATAACTTCTGCTGATATTTTAGCCAAGGTATAGGACAATTACATATGAAATTCTGTAATGCTAAAGCTTAAACATTGCATATTAAACAAATGTAAGCCCTAAATAACAAAATATCTAAAAAATAAAATAAATAATTTTTTACTTGATTATAGCAAATCTAAATCTAAATTATGCTAAGCACTTTAATATCTTTTATTATGATAGAAACCATCATGAGAAAATTTGAGCTTAATTTTTTCAAATACATTGAAATTATCTGCCACACCACTGAGTATAATATATTGGAGATTTTTCTTGAATTGAAATCAATTTCATTATATCACATCTTTAGTATATTTAACACACATCCATGAGGACATTTTCTTAGGCAGGGGTCTAAAAGCAGTCACTGTACAAGGAGACAAGCTTTTATGATGAGAAAGAATGAAAAAAAAAAAAAAAAAATCCTTTACAACCAAAGTGTCTGCAGATTTTTCTCAGCAAGGGCAACTCAATGCCAAAATCAATATGAACATCTCCTTTGAGGTAATATTAAAAACAGTACGAGTACATAAAAGTAGGGAGACTTATAATGCTAAAAAATAAGTAAATAATAAAACCTTCTGAAGTGATAGGAACAGATAAGATGGTGCTGTAATTCACCCTATGATATCATAATGACCAAAATGTGCTTTTCATTTCAGTACTCTTCCCAGTAGAGTAGATGAGTCTATCATAAAAGAAATAGCAAGTGTTAATCTGTGGGAGGTATTGTGTGTTTCTCATCAGCTCAGAGGGTACGGAATAATTCTGCCTGCTTAAATGTAAAGCAGATAACAGCTCTGGATGGTGGTATTCTAGAAAAAGTGATAAACCAGGATGAACAGACCTGGGGTGAAACAGTGCTTAGTCCAACAGAGCTAAATTCATTTTGCTAGCTCACGAAATGGAGTTATCTGAATCAACTGTCTTCTATATTCACCACAGGATATTGGGGAAGGCCAAGGTCAAATTACATCAAAATCTGAGAGCATTAGACTCCATTGCACGAGAAAGTTTTCCAACTCAGTCAGAGATAATCTCAATCTCCAACTGCGCTCAGCAGGGACTAAAAAGCTTAAGAACTGATAGGATCCTCAGACCACAGCAGGTCCTCATCTTCGGACACAGCACAAACAGAATCCCCGCACAGGTTAGCGTGGCGCATTCCAAGGATTTGAAGCTTCTTCACCTGCCACTGGCTGGTTCCAGTCGAGGTTCATGGAGCAAGGCTAATACACCTATACACAATACACTGAATGACTATGGCAAAAGTTGCTGTATGCAACCCAATGGCTCTGTGGCAGTTCAGCACCACGGACAGTTCCAGCGCAGCGTTGCGTTCAGAGAATGTCCACTCTGGACGTTGCCCATGTATCTAATCCATCACAATCAGCTCCCCGATAACACACACTGGACTGATGCGTGTTCCCGCAGATTGCCAGAAGACAAACAATCTCACTTTGCCAACCTCTGTAATGGATTTGTGCTGCATTTGTCCATGTTTTCAATACTTACGTGGGTTTTACGCGTATGCCCGTTAAATACTCACATATCGAAGAAAAAAACTGATTCAGCGAAGAATGGGACCTGTTCGGATGAAGTTTCAACCCTGATCTACGTTGTGCTGTCTCTCATCATTGCTATCTGCTGGCACAGTTTTTACCATTTTCCAAAAACACCATTTAGAGCTTTTGGCGGCCACATAAAAGACAAAAAAGACCTTTTAGCGTGCACACACAACGACAATTACACAAATAAGCGCAAACATCAGCATCCAGTAGTGTGCTAGCTCAATGGCTCATTCATCCTATACTGATGTGCGATATAGCCATGGATGAGAGCCCAAGAGAGCTGGTGAAACCTTTCCTAGTCTTGTAAATATGCCTCAATGGGGCCTTTTTTCTTCAAATGGCTGTCTGCAGGTAAAGTGGCTGCCTAACAAGTCCTCAAATTAATGAATGACTCATGCATGAAGGCCCTTCTGCAGCAATTCCAGCACATCAGAAATTTCACAGCAACGACTGATTGGTTGAACATGCAGCAAGCAGACAGGCCCGAACAGGAGCGAAGCTTTATGATGGTGAGCTGTAGCCCATTATTTTATGATAATGAGCTGGATCACCAAATCCATCCTGATGCTGAGATTTCTACGAGACAAACGCATAGAAAGACAGGCACGGGAACATTGGCTCCCTGATTAGAGCTTGAAAACAAAGAGACCCTTGGGAGTATGCAGTTGAAAAGAAGGTAAAGATGTGACATGACACCTTTCAACTAGGCAAACAAAAACATTGATGCGTGTACGAAATGACAAGCAATAAGAGATATGCATGAAAGCAATGCTGCTAAAAGGTTTCAGCTGTCATCAGGAATTTCTTGACACAGAATTTCTTTGATTTTTACAAAACTATGTGTCTTTTAAACCTCAGTGTCACATTGTGTTCTAACTAAAAGTGAAACAATAAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000340_07347497_07355645.mRNA True 2767 mRNA 0.39 5 7346820 7356850
Loading

Neighbor


gene id symbol gene type direction distance location
CI01000340_07316270_07338395 BRINP3A.2, BRINP3 coding downstream 7477 7315451 ~ 7339343 (-)
CI01000340_07094782_07128154 BRINP3A.1 coding downstream 218578 7094491 ~ 7128242 (-)
CI01000340_06980994_06986987 RGS8 coding downstream 358406 6980923 ~ 6988414 (-)
CI01000340_06967769_06969169 RGS16 coding downstream 377612 6967002 ~ 6969208 (-)
CI01000340_06943742_06951136 RGS5, RGS5A coding downstream 395498 6943742 ~ 6951322 (-)
CI01000340_07543307_07544545 HES1, HER6 coding upstream 186169 7543019 ~ 7544752 (-)
CI01000340_07546144_07547567 NA coding upstream 188829 7545679 ~ 7547567 (-)
CI01000340_07651745_07673195 OPA1 coding upstream 294138 7650988 ~ 7673671 (-)
CI01000340_07778322_07787234 NA coding upstream 420893 7777743 ~ 7787463 (-)
CI01000340_07994499_07999442 CTH, CGL coding upstream 637649 7994499 ~ 7999651 (-)
G490215 NA non-coding downstream 43768 7265768 ~ 7303052 (-)
G490134 NA non-coding downstream 193041 7153498 ~ 7153779 (-)
G490132 NA non-coding downstream 197519 7148959 ~ 7149301 (-)
G490130 NA non-coding downstream 200210 7146372 ~ 7146610 (-)
G490126 NA non-coding downstream 215120 7131441 ~ 7131700 (-)
G491147 NA non-coding upstream 58560 7415410 ~ 7415669 (-)
G491154 NA non-coding upstream 81974 7438824 ~ 7439035 (-)
G491168 NA non-coding upstream 94303 7451153 ~ 7456580 (-)
G491179 NA non-coding upstream 129598 7486448 ~ 7488082 (-)
G491180 NA non-coding upstream 147899 7504749 ~ 7504955 (-)
G489511 NA other downstream 1019448 6320457 ~ 6327372 (-)
CI01000340_06095704_06194498 MAST2 other downstream 1126178 6095704 ~ 6194501 (-)
CI01000340_05321995_05329778 ATG4C other downstream 2021676 5320753 ~ 5330215 (-)
CI01000340_04598932_04627160 NA other downstream 2687759 4598714 ~ 4627447 (-)
G488862 NA other downstream 2750559 4507196 ~ 4518120 (-)
G491712 NA other upstream 1442351 8799201 ~ 8799577 (-)
CI01000340_10025958_10028902 SRSF3 other upstream 2665042 10025656 ~ 10029589 (-)
CI01000340_10357202_10357606 NA other upstream 3000334 10356758 ~ 10359856 (-)
G493109 NA other upstream 4316896 11673746 ~ 11677994 (-)
G493266 NA other upstream 4710327 12067177 ~ 12116900 (-)

Expression


CI01000340_07347497_07355645 Expression in PRJCA010000

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The chart has 1 Y axis displaying values. Range: 0 to 0.25.
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CI01000340_07347497_07355645 Expression in each Bioproject

Bar chart with 14 bars.
CI01000340_07347497_07355645 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 10.
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Co-expression Network