CI01000340_07546144_07547567


Basic Information

Item Value
gene id CI01000340_07546144_07547567
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 7545679 ~ 7547567 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_07546144_07547567.mRNA
ATACAATAACGACATGATCTCACAAAAGGTAACACTGCAGGAAAACGCACACGGGACTGGCAGCGTCCAGGTGCTTGGGGGGTGGACGCGCGCAAAGCCGGCAGGAGCAGCGCCTTCCCCCGCCGCTTGCGCGCCACGTGTCGCGGGGTCTGCAGCAGCTGGAGACTCTCACCCCTGTAAATGTGCCTATCAGAGGGCTGGCAACACACTCCACACACTCCAACCAGTGTCTTTACTGTTAGTGGATTATGACACCACTAAATGACAAGTCTGATAGTTTATGATAGATGGCAAATATATACAATATGTTAACGTCATCGTTTAAACGTCAATACATTCGACAATCTCTTCACTTTAGCGCACCGTTCACAAGGTTTTGTCCAAAATGTGTTTGGACTTTGTGTTTTCATGGCAGTACAGGCAGAAAACCATGAATGAATCTTAGTGTTTTGTGGCGTTTGTTTGCGACCTTGTCCGAGGATCATAAAATCATGACCTAAATTAGAGCTGCTTCTGTCAGACACAGTCAAGGACACTATCCGCGCTGTACGCGCTTTCGGTCTGAAATATCTTCACACTGGCTCGCATTCCGATAAGCCCGATCGAGCTCTCAGTGGGCGTGGTTTTCCCAGGCTTTTAGAACAGCAGCTGCTATTTACCTTCCCTCTAATGTAAACCACCACCGCCACCCCTAGCCCGCCAGCCAAACCTCAACCACCGAGGTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_07546144_07547567.mRNA True 730 mRNA 0.49 2 7545679 7547567

Neighbor

gene id symbol gene type direction distance location
CI01000340_07543307_07544545 HES1, HER6 coding downstream 927 7543019 ~ 7544752 (-)
CI01000340_07347497_07355645 NA coding downstream 188829 7346820 ~ 7356850 (-)
CI01000340_07316270_07338395 BRINP3A.2, BRINP3 coding downstream 206336 7315451 ~ 7339343 (-)
CI01000340_07094782_07128154 BRINP3A.1 coding downstream 417437 7094491 ~ 7128242 (-)
CI01000340_06980994_06986987 RGS8 coding downstream 557265 6980923 ~ 6988414 (-)
CI01000340_07651745_07673195 OPA1 coding upstream 103421 7650988 ~ 7673671 (-)
CI01000340_07778322_07787234 NA coding upstream 230176 7777743 ~ 7787463 (-)
CI01000340_07994499_07999442 CTH, CGL coding upstream 446932 7994499 ~ 7999651 (-)
CI01000340_08007878_08016645 CTH coding upstream 460130 8007697 ~ 8017282 (-)
CI01000340_08020667_08025048 NIT2 coding upstream 472888 8020455 ~ 8025048 (-)
G491205 NA non-coding downstream 9023 7536430 ~ 7536656 (-)
G491203 NA non-coding downstream 15647 7529810 ~ 7530032 (-)
G491183 NA non-coding downstream 36489 7508979 ~ 7509190 (-)
G491180 NA non-coding downstream 40724 7504749 ~ 7504955 (-)
G491179 NA non-coding downstream 57597 7486448 ~ 7488082 (-)
G491210 NA non-coding upstream 1248 7548815 ~ 7549022 (-)
G491232 NA non-coding upstream 19109 7566676 ~ 7566906 (-)
G491233 NA non-coding upstream 22285 7569852 ~ 7570135 (-)
G491249 NA non-coding upstream 61140 7608707 ~ 7608935 (-)
G491254 NA non-coding upstream 65291 7612858 ~ 7613169 (-)
G489511 NA other downstream 1218307 6320457 ~ 6327372 (-)
CI01000340_06095704_06194498 MAST2 other downstream 1325037 6095704 ~ 6194501 (-)
CI01000340_05321995_05329778 ATG4C other downstream 2220535 5320753 ~ 5330215 (-)
CI01000340_04598932_04627160 NA other downstream 2886618 4598714 ~ 4627447 (-)
G488862 NA other downstream 2949418 4507196 ~ 4518120 (-)
G491712 NA other upstream 1251634 8799201 ~ 8799577 (-)
CI01000340_10025958_10028902 SRSF3 other upstream 2474325 10025656 ~ 10029589 (-)
CI01000340_10357202_10357606 NA other upstream 2809617 10356758 ~ 10359856 (-)
G493109 NA other upstream 4126179 11673746 ~ 11677994 (-)
G493266 NA other upstream 4519610 12067177 ~ 12116900 (-)

Expression


Co-expression Network