CI01000340_07778322_07787234


Basic Information

Item Value
gene id CI01000340_07778322_07787234
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 7777743 ~ 7787463 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_07778322_07787234.mRNA
ATTTGATCTGTCATTCACTAACTGAGCACATCTATAAAAGAATAATGTGGTGGTCTCAAACTGCTCTATTTAATGGTGACTCACCAAAGACTATGACAAATGGTACTGTCTGGTAAACAAGGCTAAGATTTAAGTGGTGGAGAAGATAGGTGATTATTCTCCGAAAAATGTGTGTGGGCTATCCTCATTCGATCCCTACAAAACAAACAAGCACACTCATTCTCTGATGATGCCCAGTATTGACCCGTCTGCTAGAAAGAATGACCTAGCAAAACTGTTTCGTCCACACAAATGTTCAGGATACATCAAGATAGCTCGAAGAGACCGCAAGTACAGTCTGTTCAAATTTCATAAAGGACAAATAAGATATTTTAATCGCATTACGTACGATTTGGCGTTTCAGGATTTGTGCCACCGTGAAATGGGAGTCAACATATCAGTCAGTACCTTGCAGGTCTCAGCTCACTTCCTCAAAGTTGATTGGATCTTTCGGAAATGTGCTGGACATGGCAGACTGCTCTACATCACTGACAGTGAAGGTTTCATCACCAATTCTAACACCCGAAACAGCAGGATGGCTGGTGTCAAAGCACCGCAGAGATCTACTCGGACATACCTCACAATACCTCCTCACAAAGGCGTAAGTGGTTCCCACTGGGGTGTAGGATACTGTGAAGGAAAGAGTACGGACCTCCACGTGTGCTTATGGAGGAAGCAGGCAGCTGCATATGGTAAAAACTCCAGCTTACCCACTGCCGCATCTTACCCCACTCTACCCTATTCCAAAACCACAGCAGCCCTATATATTTCGCATCCAAATTTGTATTTCCAGGCCAATGCGCATTGTTACCAATTTAAATAAGCATGTGCTCTCAAAGTCTCAAAACAGCAGAGAGAAGAGACTGTAATCAAGTCATGTTTGTTCTTTCTCTCTCCCTGAAATTTCCCTTAATCATCTTTATTCATCCCTTCAAAGCACTGCTCTGTGAAGCTCATGAGGGCAAACCTCTTCACACTGGTGGGATTTTTCATTTCATGATCTCTTCAGAATCCACAGAGGCTTTCTACATTGTGAAACACTGATTAGGTCTTCATCTGGTGTTTTCTGATTCAAAACATGATTTCTGAAAAGCAGATTCATGAGGCCTTTGACTTTTTTTGGCTTGAAGTATAAGTTTTCAGATTTGATGCATCTAAAGAACCATGTCTAAGGTAAGTTAAACACACCGAACCTGTATGCGTCCTTAAAACACTGACTACGTTGAGCTCCACCAATTGCTGTTACAGTACAGGGTGTTTTTTGTAATCTAAACTGGATTTTCTTTTCATTTCGGATTGACCCAGATTTTTTTGTTCTTCTGATCACTCTTTCCAGCTCAATGATTCACTTAAGGTATGTTTCCTGGCAAAGCTTTTGAGACAGATTCCAAAAAAGATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_07778322_07787234.mRNA False 1441 mRNA 0.41 4 7777743 7787463

Neighbor

gene id symbol gene type direction distance location
CI01000340_07651745_07673195 OPA1 coding downstream 104072 7650988 ~ 7673671 (-)
CI01000340_07546144_07547567 NA coding downstream 230176 7545679 ~ 7547567 (-)
CI01000340_07543307_07544545 HES1, HER6 coding downstream 232991 7543019 ~ 7544752 (-)
CI01000340_07347497_07355645 NA coding downstream 420893 7346820 ~ 7356850 (-)
CI01000340_07316270_07338395 BRINP3A.2, BRINP3 coding downstream 438400 7315451 ~ 7339343 (-)
CI01000340_07994499_07999442 CTH, CGL coding upstream 207036 7994499 ~ 7999651 (-)
CI01000340_08007878_08016645 CTH coding upstream 220234 8007697 ~ 8017282 (-)
CI01000340_08020667_08025048 NIT2 coding upstream 232992 8020455 ~ 8025048 (-)
CI01000340_08029268_08031877 NA coding upstream 241619 8029082 ~ 8032004 (-)
CI01000340_08036162_08043659 PLCXD1 coding upstream 247865 8035328 ~ 8044456 (-)
G491216 NA non-coding downstream 44239 7731846 ~ 7733504 (-)
G491299 NA non-coding downstream 75037 7701612 ~ 7702706 (-)
G491254 NA non-coding downstream 164574 7612858 ~ 7613169 (-)
G491249 NA non-coding downstream 168808 7608707 ~ 7608935 (-)
G491233 NA non-coding downstream 207608 7569852 ~ 7570135 (-)
G491355 NA non-coding upstream 52730 7840193 ~ 7841121 (-)
G491362 NA non-coding upstream 66613 7854076 ~ 7855024 (-)
G491363 NA non-coding upstream 67759 7855222 ~ 7855849 (-)
G491391 NA non-coding upstream 100461 7887924 ~ 7888971 (-)
G491392 NA non-coding upstream 102790 7890253 ~ 7892742 (-)
G489511 NA other downstream 1450371 6320457 ~ 6327372 (-)
CI01000340_06095704_06194498 MAST2 other downstream 1557101 6095704 ~ 6194501 (-)
CI01000340_05321995_05329778 ATG4C other downstream 2452599 5320753 ~ 5330215 (-)
CI01000340_04598932_04627160 NA other downstream 3118682 4598714 ~ 4627447 (-)
G488862 NA other downstream 3181482 4507196 ~ 4518120 (-)
G491712 NA other upstream 1011738 8799201 ~ 8799577 (-)
CI01000340_10025958_10028902 SRSF3 other upstream 2234429 10025656 ~ 10029589 (-)
CI01000340_10357202_10357606 NA other upstream 2569721 10356758 ~ 10359856 (-)
G493109 NA other upstream 3886283 11673746 ~ 11677994 (-)
G493266 NA other upstream 4279714 12067177 ~ 12116900 (-)
G491325 NA non-coding upstream 1349 7782920 ~ 7808176 (-)

Expression


Co-expression Network