CI01000340_07929169_07934135


Basic Information

Item Value
gene id CI01000340_07929169_07934135
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 7928482 ~ 7934419 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_07929169_07934135.mRNA
GTATTAAAGGGTGGAGAGAGAAAAATAGCTGCACACAATCCTGGCTGCATCTCCAAACAGTAATAATTTGGCAATAATAGGCAATTCATTGCTTGATTCTTTGATGTATTTCCGACTTAATAATCTCAAAGCAAGGCAGAACCTCAAAGGATTTTGCAGACTGCATAGAAAAGCACTGAAGCCAGCCTTTTATGGCTGCCTACTCATATCAGCAAGCTCTTTTTGTTTCCTTCCCTGACATAAAAGATCATATTGAATTCAATTATAGCCAACCTCTATGGCTAAAGTTGGCTGTTTACTTGTGGCTCAATAATACCGCCGCACAGTCACATTGTCTATCTGATTAAAAATGTCAGCGGAGTCTCATAAGTGACAGATGGACTTAGATATTGTTCCTTGATATTTTTAGTGCAGAAACAGGTGTGTGTTTCCAGGGAGCGCTGCGAGATTCGGTCTTGGTCTGTTAGCAATGAGACGCGCTCGGGAGTGACCGGAGCCTTGCCCTCCTTGTCAAAAACAGGATGGTGTCCGCCGGTCATTTTTGTCAGAGAACAGCCTGATTTGCCGGCCGTGATTGTCGAAAGCTGCTGTCGACACAAGTGCGAGGTGTTATGGAGGCACCAATCAGGCTGACAGATCTGAGCGTGGTGAGGGAACTGCCTGAGCTCATTTTCAAACATCAGGAGAATGAGCAGACAAGAGGGTGTCTTTGACTTTGCCAAGCCCCTCAGCCATTGCCAATCCTCTAGCACTTCATCAAGGATTGATATCAACACTCAATTGGTACTTGGAGAGAAACAGACACACACCAAGTGCCAACGCCCTGCTCATCCTGAAAAAATGGCAGATTTTTGCTCCAAGACGGTATCTCTCAAAGTCACCAGGGATATCTGTGGTAGCCACGATAGCTTTGTTGTTGCTGGGAGTTCTTTACCATGGTGACGGCATGTCAACTGCTCCTCTCTGCACTAAGGCACTTGGGGCAGAGAGCATTCATGAGGTCTTTTTTCTCTTATGAAGTGAGCATGACAACAAAAGAGAAATGGCTTGCCATTAGAACAGGGTGAGAAGTGGGTCACTGGCCTATTATACAGAGGTTGGTGCACAATCTGGGATGAGTGAACTCATTCTGTTGCACAGAGAGATAGCAACATATTTAGATTTTGCCTTAAAAAGCGTTAGTGTTATTTACCAGTCTTTCAGAAGTCACTGAACAACTTCATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_07929169_07934135.mRNA True 1226 mRNA 0.45 3 7928482 7934419

Neighbor

gene id symbol gene type direction distance location
CI01000340_07920331_07924545 NA coding upstream 3937 7920331 ~ 7924545 (+)
CI01000340_07794457_07834047 NA coding upstream 92756 7793768 ~ 7835726 (+)
CI01000340_07752737_07754368 NA coding upstream 173185 7752737 ~ 7755297 (+)
CI01000340_07721395_07728614 TRAF3IP2L coding upstream 199730 7721395 ~ 7728752 (+)
CI01000340_07701724_07717637 CHD1L coding upstream 210630 7701386 ~ 7717852 (+)
CI01000340_07948302_07952600 NA coding downstream 13009 7947428 ~ 7952706 (+)
CI01000340_07954531_07957240 NA coding downstream 20112 7954531 ~ 7957308 (+)
CI01000340_08017397_08018781 NA coding downstream 82931 8017350 ~ 8019004 (+)
CI01000340_08024828_08028479 GTPBP6 coding downstream 90409 8024828 ~ 8028608 (+)
CI01000340_08076352_08117930 SLC9A7 coding downstream 141933 8076352 ~ 8119164 (+)
G490455 NA non-coding upstream 57322 7859276 ~ 7871160 (+)
G490466 NA non-coding upstream 105453 7747670 ~ 7823029 (+)
G490482 NA non-coding upstream 184888 7743380 ~ 7743594 (+)
G490448 NA non-coding upstream 195671 7732018 ~ 7732811 (+)
G490465 NA non-coding downstream 25253 7959672 ~ 7962143 (+)
G490502 NA non-coding downstream 114196 8048615 ~ 8048994 (+)
G490437 NA non-coding downstream 115468 8049887 ~ 8051962 (+)
G490503 NA non-coding downstream 117667 8052086 ~ 8053101 (+)
G490442 NA non-coding downstream 121766 8056185 ~ 8065521 (+)
G489634 NA other upstream 1227694 6694221 ~ 6700788 (+)
CI01000340_04660938_04668996 NA other upstream 3263297 4659584 ~ 4669322 (+)
CI01000340_04399692_04401164 NA other upstream 3526986 4399419 ~ 4401496 (+)
G487133 NA other upstream 3945937 3973915 ~ 3982545 (+)
CI01000340_02930635_02933799 LSM2 other upstream 4996682 2930635 ~ 2933935 (+)
G490645 NA other downstream 1104393 9038812 ~ 9043101 (+)
G490826 NA other downstream 1190765 9125184 ~ 9131397 (+)
G490839 NA other downstream 1300554 9234973 ~ 9237559 (+)
G490896 NA other downstream 1897054 9831473 ~ 9845052 (+)
G492194 NA other downstream 2717264 10651683 ~ 10652694 (+)

Expression


Co-expression Network