CI01000340_08017397_08018781


Basic Information

Item Value
gene id CI01000340_08017397_08018781
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 8017350 ~ 8019004 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_08017397_08018781.mRNA
CCTTAAGGGTGCGCTTTTGACAAAAACCACATGATTATCTTTGAGCGATGACAGAGACCTGGTTTGGTGCTTTGCTGCTTAGCGTGACAAGTGTTACATCAGTACAAGCTGATGAATGCATAGTGGGAGTGATTGGGGAGCGTGCTCTCCTTCCATGTGTTTATACTGGGGTAAAAAATTTGACCTCCTTCCACATCTCATCTGAATGGAGAAGAGGAATGGAAACAGTGCACACTGCAGTCTGGATAGAGGGACAAGTGGATGATCAAAATGTATCCAACAGTATCCGGACTACAGTGTCATCTTTAGCCCCAAAAACTGGAGATTTCTCCATGGAGTTACACGACATACATTTATCAGATACACATAATTACAGTTTTCATCTTAAGCTTCATGGTGAAAAAAGTTGCTCTCTTTGCACTGTCTGTCTCACCGTCGCAGGTCATTTCAGCCATCCTACTTTATTGAGAGAGAATGGAGTGGATGGTGGCAAATCCAGACTGTTTTGCAACTCTAGAGGAGGATTTCCTGCTCCATCCATCTACTGGCTTGTCAACCACACACAGCGTCCTCCAGAAACATTAGTCACAATTTTAATAAATACTCTACCACAGTCTCAACTCTACAACATCACAAGTATTCTATCCATCAACATATCAGCAGATGCTGCTGTAACCTGTGTCATAAAAAACAACCTGCTGAATGAAACTTTAACAGCAACGAACTTTGGCGTTCGGTCAAGTACATCGGTGGTACGGCTGTCAGAGCACATGTGGGCATTCAGTGCTGCTCTCTGTGTGGTTGTATTCTTGCTGGTGGCTGCGTCTCTGGGTTTCCAGAGGAAATGGGATCAAGATAGAAAAAGAAAGCAACACAAATGTGGAGATGATTCATCTAGCGAGGGCACTGGCATGATTGTGTTCGATTTGGAGCAATGGGCTTCCCTTCCAGAGACGGATGTGTAACATGGTTTGGAAAGGCATTCTAGGTTGATACCATTAACTTCTGCAATGCTTATTCACACTGGAAATGATTCAGAGTTTCACTTCATAATCTGATTCAGTGGATGAATCACCTTGAAATGGTACAAACTTCATTCAAGGCCATTGGTTTATGCTTTTCTTTCATTGAATATCCTTTTTTCCATACAAACAGCTAAACAAAAGGCCTTCAACAAAGTACAATAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_08017397_08018781.mRNA True 1188 mRNA 0.42 5 8017350 8019004

Neighbor

gene id symbol gene type direction distance location
CI01000340_07954531_07957240 NA coding upstream 60042 7954531 ~ 7957308 (+)
CI01000340_07948302_07952600 NA coding upstream 64644 7947428 ~ 7952706 (+)
CI01000340_07929169_07934135 NA coding upstream 82931 7928482 ~ 7934419 (+)
CI01000340_07920331_07924545 NA coding upstream 92805 7920331 ~ 7924545 (+)
CI01000340_07794457_07834047 NA coding upstream 181624 7793768 ~ 7835726 (+)
CI01000340_08024828_08028479 GTPBP6 coding downstream 5824 8024828 ~ 8028608 (+)
CI01000340_08076352_08117930 SLC9A7 coding downstream 57348 8076352 ~ 8119164 (+)
CI01000340_08127948_08139978 TUBGCP5 coding downstream 108944 8127948 ~ 8141062 (+)
CI01000340_08150345_08170718 CYFIP1 coding downstream 131341 8150345 ~ 8170846 (+)
CI01000340_08175512_08182712 CYFIP1 coding downstream 156247 8175251 ~ 8183269 (+)
G490465 NA non-coding upstream 55207 7959672 ~ 7962143 (+)
G490455 NA non-coding upstream 146190 7859276 ~ 7871160 (+)
G490466 NA non-coding upstream 194321 7747670 ~ 7823029 (+)
G490482 NA non-coding upstream 273756 7743380 ~ 7743594 (+)
G490502 NA non-coding downstream 29611 8048615 ~ 8048994 (+)
G490437 NA non-coding downstream 30883 8049887 ~ 8051962 (+)
G490503 NA non-coding downstream 33082 8052086 ~ 8053101 (+)
G490442 NA non-coding downstream 37181 8056185 ~ 8065521 (+)
G490471 NA non-coding downstream 167067 8186071 ~ 8186347 (+)
G489634 NA other upstream 1316562 6694221 ~ 6700788 (+)
CI01000340_04660938_04668996 NA other upstream 3352165 4659584 ~ 4669322 (+)
CI01000340_04399692_04401164 NA other upstream 3615854 4399419 ~ 4401496 (+)
G487133 NA other upstream 4034805 3973915 ~ 3982545 (+)
CI01000340_02930635_02933799 LSM2 other upstream 5085550 2930635 ~ 2933935 (+)
G490645 NA other downstream 1019808 9038812 ~ 9043101 (+)
G490826 NA other downstream 1106180 9125184 ~ 9131397 (+)
G490839 NA other downstream 1215969 9234973 ~ 9237559 (+)
G490896 NA other downstream 1812469 9831473 ~ 9845052 (+)
G492194 NA other downstream 2632679 10651683 ~ 10652694 (+)

Expression


Co-expression Network