CI01000340_08171358_08172020 (FNDC9)


Basic Information

Item Value
gene id CI01000340_08171358_08172020
gene name FNDC9
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 8171213 ~ 8172244 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_08171358_08172020.mRNA
AGCCTATTGGTAATGTATTATTCAATGTATTACCATGCCTACCATTGTATTACCATGCCTTGTTGTGCCACATTCAAGGTTAGAAATTATCTGAAATCTGAATAAATGTTTTTATTTCCCCTATTTTTCCAGATTATTCAAAATCGTTGCATGACGTCTTAATCCAGCCTACATCATCAAACTGTGCGTGCATGAGAAAGTCTTAACCTAAAGACAAACTCAACATGACTATCACTGTTCAGAACGTCACCGCCACCTCTGCCATCGTCAGCTGGCCGTCTTCTCCAGGCTGTGTGGACACATTCTACAGCGTCATGTATCACCCTAACTGGAACAGCCTTCTGATGGGTTACACACGCAAGAGTTTTCTGCGCGAGGACAGGGTTCCCGTGAGCCAGACGTCTACCAGTCTGGGCAACCTCAGTCCTCAGACCACATACATCCTCTGTGTCACCTGCCAGTCTGCAAATCCCACCAGAGAGCAGTGCCAAGTCTTTAGTACCCTAGATGAGGGCACTGAGCTCGGGGAGAGCAGCAGGGAGCTGGCAATGGGAGTCTGGCTGGCCAGCAGCATTCTCTTGCTGATCATTGCCGTGGCTCTGCTTTGGGGATGTCTCCACACCATGTGTCCAGCAAAAAGGAACCCAGAAAGAGGTAGCCAGCCAGGTCCGAACCCTCCACACCTGGCTCTGACCCCCATGGGTGGGAACATGAGAAGTGAAGGAAGAAAAAGTCTATACATGCCCGGTTGCGGCGAGGAGGACTTTCAGAATGCAACAGTGATCGAGAATCCTTTTCGAGTCGAGCGTGGCAGAGAAATGGCAAACGGGAGTCGTGAACTTCAAACATCAAGTAATAAACAAAGATTTGGCCCCGAGTCAGAATAACTGGGCTGGCAAATTGTCACTGTGACATACAGACCCTCAAAATTGAAACTATTAGAACCTACACAATGAGGACCATCACCGGGGTGGAAACCAGGCAGTTGGGCTAGGCTGACCGGGTTAAATTAGCATTTAAATGTCAGATAAA

Function

symbol description
fndc9 Predicted to be integral component of membrane.

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_08171358_08172020.mRNA True 1032 mRNA 0.48 1 8171213 8172244

Neighbor

gene id symbol gene type direction distance location
CI01000340_08125568_08126818 CHST7 coding downstream 44395 8125092 ~ 8126818 (-)
CI01000340_08067248_08072622 RP2 coding downstream 98299 8066024 ~ 8072914 (-)
CI01000340_08050696_08058355 JADE3 coding downstream 112858 8050274 ~ 8058355 (-)
CI01000340_08036162_08043659 PLCXD1 coding downstream 127097 8035328 ~ 8044456 (-)
CI01000340_08029268_08031877 NA coding downstream 139209 8029082 ~ 8032004 (-)
CI01000340_08187529_08192962 NIPA2, NIPAL4 coding upstream 14919 8187163 ~ 8193114 (-)
CI01000340_08195799_08197646 NIPA1 coding upstream 23213 8195457 ~ 8197646 (-)
CI01000340_08327142_08338311 NA coding upstream 154708 8326952 ~ 8338448 (-)
CI01000340_08374101_08387155 GABRG3 coding upstream 201835 8374079 ~ 8387549 (-)
CI01000340_08502336_08507603 NA coding upstream 330001 8502245 ~ 8509133 (-)
G491475 NA non-coding downstream 40708 8128902 ~ 8130505 (-)
G491448 NA non-coding downstream 51427 8117561 ~ 8119786 (-)
G491427 NA non-coding downstream 224579 7946374 ~ 7946634 (-)
G491417 NA non-coding downstream 227067 7943885 ~ 7944146 (-)
G491471 NA non-coding upstream 13052 8185296 ~ 8185607 (-)
G491565 NA non-coding upstream 260367 8432611 ~ 8435645 (-)
G491687 NA non-coding upstream 497369 8669613 ~ 8669929 (-)
G491658 NA non-coding upstream 631471 8803715 ~ 8806687 (-)
G491724 NA non-coding upstream 708149 8880393 ~ 8880664 (-)
G489511 NA other downstream 1843841 6320457 ~ 6327372 (-)
CI01000340_06095704_06194498 MAST2 other downstream 1950571 6095704 ~ 6194501 (-)
CI01000340_05321995_05329778 ATG4C other downstream 2846069 5320753 ~ 5330215 (-)
CI01000340_04598932_04627160 NA other downstream 3512152 4598714 ~ 4627447 (-)
G488862 NA other downstream 3574952 4507196 ~ 4518120 (-)
G491712 NA other upstream 626957 8799201 ~ 8799577 (-)
CI01000340_10025958_10028902 SRSF3 other upstream 1849648 10025656 ~ 10029589 (-)
CI01000340_10357202_10357606 NA other upstream 2184940 10356758 ~ 10359856 (-)
G493109 NA other upstream 3501502 11673746 ~ 11677994 (-)
G493266 NA other upstream 3894933 12067177 ~ 12116900 (-)

Expression


Co-expression Network