CI01000340_09137611_09140263


Basic Information

Item Value
gene id CI01000340_09137611_09140263
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 9136710 ~ 9140263 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_09137611_09140263.mRNA
GTTTAAAAAAAACCGCTTTTTTTCTAGGACAGCATTCGCATTTTTCAGCTTTTCATTTTCTTTCTGCAGAACCATTACATCATCATGAACTGAGGTAAGAGATTTGCCCAAGGCCTCAATGTTGGAAGAATTCTCCTTAACTATTCTTTCAGTCTGGTCGGATCTCTCATTAATCTTTTCAGAGAGAATTCGGATGATATTTTCCTGCACGTTACTCAAAGACAGTTCACTTTGTTTGTTAGATGAGACGACAACACTTTTTTGCCTTTTGGGAGGTTGATTTTTGCTTGGTGTATTTGGACAAGAATCACAAATTCCTCAGTTTTTTACTGTACAGGCATACGAGTGAGTATCGTTAAAGTTTCTCTTCTCTTTCGTACTGTCAATCTCCATATCTGCCCCAAGATCCTCATCCATGTTTTTGAACTGTGCAGCGAAACGGTTGATTTTGTGATTTAAAATCCTTGTCGATGCTCCAAGGTCAATATTTAATTAAATTCAACAGTCAATAGCAACCATTAGATAATAGTTAGCAACTTTATGAAATTTATATAATCATTTGTGAGAAAAACCCGATTTGTTTCTCAGCTTAGAGAATCAAGACCATCCACGGCGCCATCTTGGAGCTCCCCCCAGTCCCTCAAAAAAAAAAAAAAAAAAAAACGCTAAAAGAAGAAGAGATCACGCCATGACGTATCAATGTCTACTGGTCACGTGTCTTCACTTTAAACGAATATGCAGGGCAGAGTCAGAGACATTATAAATGGGCGGAGTTACCAAACTTGAACTTCAGCCAGATTAGAATGAGCTTGTGTTATCCTGTCTCCCGCATTCGGGTACGAATGGACTGAAGTCAGTGGAACAAAAAGTGTACCTTCGTGTTCCAGGTGTGTTGTTTAAAATGACGCTGATTATGAACGCTTGCGCTTTTTTATTCAAAATCCTCACGCTACCGCTGCACGTTGCAGAGCTGGTTGGACTTTTGTCTTTATACAAACGCGTTTTTCCTCGAGTCGTGTATAACTTTACGTTAGCGTACAATGAATTAATGAACGACAAGAAAAGCGAACTGTTTCGAAACCTGGCTAAATTCTACCCCCCGAAAGGCTCTCTGCGCATCTTGGAGGTGGGCTGCGGATCCGGGGCGAACTTCGAGCACTACCCGACGGGCTGCAAGATCACATGCATCGACCCCAACCCGCATTTCAAAAACTACCTGGAGAAAAGTATGGCGAAGAACGACCACCTCGTATATGACAGCTTCGTAGTGGCGTCGGGGGAGAATCTACAGGCGGTGGAGGACAACTCGGTGGATGTTGTGGTGTGCACACTGGTTCTGTGTTCAGTCAAAGATACGCCGAAAGTTCTGCAAGAAGCAAAGAGAGTTCTTAGGCCTACTCCATTTCAACACAGCATTGTATGTATCACTGTATCTTGTTTTATGAATATCCTGTCTGTAAAATACATCACTATCAAGATTATACAAAAATACAAGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_09137611_09140263.mRNA True 1498 mRNA 0.42 2 9136710 9140263

Neighbor

gene id symbol gene type direction distance location
CI01000340_09133213_09134688 METTL7A coding upstream 2022 9132482 ~ 9134688 (+)
CI01000340_09064514_09065350 NA coding upstream 70187 9064171 ~ 9066523 (+)
CI01000340_09053887_09057663 NA coding upstream 79047 9053887 ~ 9057663 (+)
CI01000340_08999872_09005509 NA coding upstream 130726 8999438 ~ 9005984 (+)
CI01000340_08970483_08982079 B4GN1, B4GALNT1B, B4GALNT1 coding upstream 153299 8970442 ~ 8983411 (+)
CI01000340_09293326_09302243 C1QL4, C1QL4B coding downstream 152921 9293184 ~ 9302415 (+)
CI01000340_09305181_09322207 SMARCC2 coding downstream 164918 9305181 ~ 9322390 (+)
CI01000340_09339973_09344291 ENDOU coding downstream 199648 9339911 ~ 9344393 (+)
CI01000340_09364385_09394079 ITPR1A coding downstream 224122 9364385 ~ 9394525 (+)
CI01000340_09589824_09608037 SLC4A10, SLC4A8 coding downstream 449561 9589824 ~ 9608605 (+)
G490823 NA non-coding upstream 17445 9118609 ~ 9119265 (+)
G490800 NA non-coding upstream 84564 9052002 ~ 9052146 (+)
G490648 NA non-coding upstream 120158 8991150 ~ 9016552 (+)
G490762 NA non-coding upstream 226440 8909939 ~ 8910270 (+)
G490759 NA non-coding upstream 234927 8901571 ~ 8901783 (+)
G490829 NA non-coding downstream 23903 9164166 ~ 9164806 (+)
G490808 NA non-coding downstream 37581 9177844 ~ 9218507 (+)
G490845 NA non-coding downstream 83238 9223501 ~ 9223806 (+)
G490950 NA non-coding downstream 193334 9333597 ~ 9336674 (+)
G490878 NA non-coding downstream 254438 9394701 ~ 9401693 (+)
G490826 NA other upstream 5313 9125184 ~ 9131397 (+)
G490645 NA other upstream 93609 9038812 ~ 9043101 (+)
G489634 NA other upstream 2435922 6694221 ~ 6700788 (+)
CI01000340_04660938_04668996 NA other upstream 4471525 4659584 ~ 4669322 (+)
CI01000340_04399692_04401164 NA other upstream 4735214 4399419 ~ 4401496 (+)
G490839 NA other downstream 94710 9234973 ~ 9237559 (+)
G490896 NA other downstream 691210 9831473 ~ 9845052 (+)
G492194 NA other downstream 1511420 10651683 ~ 10652694 (+)
CI01000340_10781781_10785861 CAMKVA, CAMKVB, CAMKV other downstream 1643139 10781468 ~ 10787792 (+)
G492847 NA other downstream 2468843 11609106 ~ 11696961 (+)

Expression


Co-expression Network