CI01000340_09414656_09416577


Basic Information

Item Value
gene id CI01000340_09414656_09416577
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 9414656 ~ 9416977 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_09414656_09416577.mRNA
AAATATTTTAAGTTTATTTTTGGCACTAGTGTTGCAATAGCTAGTACATATGTCAGCTAGTCAAATGGCAGTATCATGCTACAAACATTAAAATTATTTCAGATGCAAAACTGACATCTTTTCTCTGTGTTAATATCAAATATAATTCAATGAAACTAAAAGATGCTTTAGTAAAGTCTTTGGCTGTCTTGAGTCAAAAAGAAGAGAAGGTTTGACCTTTGAGTAAGAAGAATGGGAGTCAAGGATACAAATGTAAACATGCCACCAATAGACTTCAGTTACTTCACAGCTACATTTACCTACAGGAATGAGCGGCGTTGAATAAAAATCATGACATGTTAGCTTCCTATTTATTTTAATAGTTTTAGGATTTTTTTTAAACAGTGCCAAAACTCCAATAATGGCCCTGGGGACGGAGTGTTTACTGGGTGATCCAACGCTGGAAGAGGAATTCAGGCGGTTAAAAAAACGTGATTTGACAGAGACGTACCTATTTCAAATGGCATGTGGTTCGTTTAGACCACAAAAATGCAGTGGTAGTGCCTTTAGGAAGCATATGATGGATAAGATAAAAATCTTTCCCGCAACTCGTCCACAGCCGAAACACCTTGACGCTCGACCTGCTATACCAACATCAGACCTCAGAGGCGCTGCTGAGTTCTATACGCGTTTCCCTGGAGACAAGCCCGCGGAACACCCGGACTGGATCAGTGACAGGAAAGCGTTCAGAGAGGCGCTTGACGGTATCGGGGATCTGCGCGGATGGCTCCATAATAAACCGATACTCACCGACCTGGAGGTTCTCGCCACGGAACGAGACAGAAAAGATAAGCGGATATCATCACCCCCTTCAAAAACAAGCATTTTCCCACCACCACCACCAGATGTTACAACTTCTCCGCTCGCGCTCAGAGGTGAAGTTGAAGAAGTGAAGAGCTTTCTGAACACTCGCGACGCCTGCAATCTCTCCAAATTCTTGGACTGGCATGGGACTGGTAAATTAAATCGTGTAGACCTCTGTGCTCTGTTTAAGAAGGACGGTTTCCGTATCCAGCCTGAGCGGATGAACGTGCTGATGTCCTATTTAAGTAGCAAGGATGGAAACTCAGTAACTGTGGAAGACCTGGCTGCTGGAATCCAAGCCTGGAGCGGAAAGCTTCAGGAAAGGGAAGAACAAAAATCAAACGCTGGTTATTGGAACGAAGACCGTGATAAAGTGATTGGGACAAGACACCTTCCAACACATGGAATCGCACTAGAGGAGAAAAATGAGATGGGCATGGAGGATATGGAGGTGCTAGCGATCATGAGGAAAGTTTTGGCCGCCACCAAGACCTCTTGCCCTTCTTCTCTGAGTGGCACTATGGGCAGAGAAGTGGATCGTTTCAGGAGACGTTGTTTCAGAGAATACCTAAAATCTATGGAGCAATGTCAACGACAGGGGCTTAATGTGAGCCAGGCCACTCTACAGAAAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_09414656_09416577.mRNA True 1475 mRNA 0.44 5 9414656 9416977

Neighbor

gene id symbol gene type direction distance location
CI01000340_09407475_09411603 NA coding downstream 3053 9406727 ~ 9411603 (-)
CI01000340_09395876_09401598 F264, PFKFB4B, PFKFB4, PFKFB4A coding downstream 11616 9395314 ~ 9403040 (-)
CI01000340_09344723_09348813 NA coding downstream 65843 9344654 ~ 9348813 (-)
CI01000340_09333908_09336663 TSFM coding downstream 77993 9333881 ~ 9336663 (-)
CI01000340_09326254_09329458 MYL6, MYL6B coding downstream 85198 9325950 ~ 9329458 (-)
CI01000340_09418240_09424587 UROC1 coding upstream 783 9417760 ~ 9424587 (-)
CI01000340_09425880_09426992 NA coding upstream 8694 9425671 ~ 9426992 (-)
CI01000340_09428701_09432767 SC61A, SEC61A1.S, S61A1, SEC61A1L, SEC61A1 coding upstream 10689 9427666 ~ 9432767 (-)
CI01000340_09439272_09443734 IP6K2B, IP6K2 coding upstream 21404 9438381 ~ 9443734 (-)
CI01000340_09489742_09491331 NA coding upstream 70237 9487214 ~ 9491540 (-)
G491660 NA non-coding downstream 276551 9133163 ~ 9138105 (-)
G491764 NA non-coding downstream 377043 9037351 ~ 9037613 (-)
G491726 NA non-coding downstream 530393 8883828 ~ 8884263 (-)
G491725 NA non-coding downstream 531261 8882593 ~ 8883395 (-)
G491724 NA non-coding downstream 533992 8880393 ~ 8880664 (-)
G491831 NA non-coding upstream 44409 9461386 ~ 9461638 (-)
G491869 NA non-coding upstream 142338 9559315 ~ 9559524 (-)
G491882 NA non-coding upstream 167884 9584861 ~ 9699676 (-)
G491933 NA non-coding upstream 180654 9597631 ~ 9598101 (-)
G491875 NA non-coding upstream 189000 9605977 ~ 9607644 (-)
G491712 NA other downstream 615079 8799201 ~ 8799577 (-)
G489511 NA other downstream 3087284 6320457 ~ 6327372 (-)
CI01000340_06095704_06194498 MAST2 other downstream 3194014 6095704 ~ 6194501 (-)
CI01000340_05321995_05329778 ATG4C other downstream 4089512 5320753 ~ 5330215 (-)
CI01000340_04598932_04627160 NA other downstream 4755595 4598714 ~ 4627447 (-)
CI01000340_10025958_10028902 SRSF3 other upstream 604915 10025656 ~ 10029589 (-)
CI01000340_10357202_10357606 NA other upstream 940207 10356758 ~ 10359856 (-)
G493109 NA other upstream 2256769 11673746 ~ 11677994 (-)
G493266 NA other upstream 2650200 12067177 ~ 12116900 (-)
CI01000340_12577571_12625562 PTPRG, PTPRGA, CA16B other upstream 3195239 12577435 ~ 12625758 (-)

Expression


Co-expression Network