CI01000340_09611318_09614740


Basic Information

Item Value
gene id CI01000340_09611318_09614740
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 9611318 ~ 9614740 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_09611318_09614740.mRNA
ATGGCGTATATAAATATGTGGATATTTTTAAACATCCTGTCATCTCTGCACTACCTCATAACAGCCTGTACTCCATCAGACAGTGGTGTGACAAATATAACAGCTTTCTCAGGAGAGTCTGTGCTGCTGCCCTGCACTTGTACCAACACACAGGACAAGCCCAAGAGCTTCTCCTGGGAAACTAAAAGCAGAAGGGCTTCTAAAGATGGCATTTACATTGATATATTCAGTGTGTTTGACCTGTACAGAGACAGAATTACACTGTTTAATCAGACTTCACCAGGAAACGTCTCTCTGCTTCTGTCAGATCTGACTGAGGATGACCAGGGATCATACGTCTGTTTGTTAGAAAAAACCTCCAGATTCATCGACGTCTCCATTAAAAAGAGAATTGAAAGTACAGCATTACCTAAGACGAGTCTCGGTGTGTTGATCTCTGTGCCGTTTCTAGCGATAGGAGGAGCAGCAGCTGTCATTTACTGCATTCACAGAGCTCACAAAAAAGCAAGGATGGAGACTGGCGAGATAGATATGGAAAATAATTTGGCTTGTCTCTTAAAACAAGCCCTGCCCTCGCAGGCGTGGCAGAATGAAGACTTAATAAATCTGCAGAGCAATATAGCTTCAGCTTTTCACAGCACAAACCGCATCACAATTTGCTTAAAACTCAGAAAATGGCAGAGGCAGCTAAACATTCATGACGGACACATTAGCATAGAAGATCTGAGAAATGCACTTCAGGAAGATACTAATGTAGAACAAATATTGCGTGACTTCAAAAAATTGGGAATAACCTATGAACTAAAACTACTTGATTACCTGACTAGAAGCATCCTAAACTATCCAACCCCCACTGAATTTCACATCTCAGAGGTGACTCATGTCACTGACATAGATGGTCTTCACAAAATCTGGGAGTCAGAGGGATTCAAGGCTCATGGTAATGATGATGAGAAGTTCTCATGGTGGAACCTGAAGATTGATAAAGAGAGTATACAAGCAGCTGAGGAGCGTTATCTGGAGAAG

Function

NR:

description
novel protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_09611318_09614740.mRNA True 1026 mRNA 0.42 6 9611318 9614740

Neighbor

gene id symbol gene type direction distance location
CI01000340_09589824_09608037 SLC4A10, SLC4A8 coding upstream 2713 9589824 ~ 9608605 (+)
CI01000340_09364385_09394079 ITPR1A coding upstream 216793 9364385 ~ 9394525 (+)
CI01000340_09339973_09344291 ENDOU coding upstream 266925 9339911 ~ 9344393 (+)
CI01000340_09305181_09322207 SMARCC2 coding upstream 288928 9305181 ~ 9322390 (+)
CI01000340_09293326_09302243 C1QL4, C1QL4B coding upstream 308903 9293184 ~ 9302415 (+)
CI01000340_09630528_09631067 NA coding downstream 15788 9630528 ~ 9631363 (+)
CI01000340_09645797_09647452 NA coding downstream 31057 9645797 ~ 9647551 (+)
CI01000340_09649643_09655912 NA coding downstream 34903 9649643 ~ 9655912 (+)
CI01000340_09656584_09660334 NA coding downstream 41844 9656584 ~ 9660560 (+)
CI01000340_09674645_09681913 PRKCDA coding downstream 59905 9674645 ~ 9682677 (+)
G491023 NA non-coding upstream 35036 9576072 ~ 9576282 (+)
G491022 NA non-coding upstream 36350 9574731 ~ 9574968 (+)
G491021 NA non-coding upstream 36836 9574250 ~ 9574482 (+)
G491020 NA non-coding upstream 38048 9570591 ~ 9573270 (+)
G490933 NA non-coding upstream 41481 9568019 ~ 9569837 (+)
G491031 NA non-coding downstream 5500 9620240 ~ 9623041 (+)
G491032 NA non-coding downstream 10118 9624858 ~ 9625218 (+)
G491052 NA non-coding downstream 117618 9732358 ~ 9733035 (+)
G490914 NA non-coding downstream 126928 9741668 ~ 9742721 (+)
G490857 NA non-coding downstream 235795 9850535 ~ 9851679 (+)
G490839 NA other upstream 373759 9234973 ~ 9237559 (+)
G490826 NA other upstream 479921 9125184 ~ 9131397 (+)
G490645 NA other upstream 568217 9038812 ~ 9043101 (+)
G489634 NA other upstream 2910530 6694221 ~ 6700788 (+)
CI01000340_04660938_04668996 NA other upstream 4946133 4659584 ~ 4669322 (+)
G490896 NA other downstream 216733 9831473 ~ 9845052 (+)
G492194 NA other downstream 1036943 10651683 ~ 10652694 (+)
CI01000340_10781781_10785861 CAMKVA, CAMKVB, CAMKV other downstream 1168662 10781468 ~ 10787792 (+)
G492847 NA other downstream 1994366 11609106 ~ 11696961 (+)
G493617 NA other downstream 3440652 13055392 ~ 13069652 (+)

Expression


Co-expression Network