XLOC_013570


Basic Information

Item Value
gene id XLOC_013570
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 39854487 ~ 39859108 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00027393
CTTTGCAGTTCTGCGAAACAGAGTGTCTACATGTCACCCGCCAGTCTGTCTTTCTCCAGAGCTCTGAGATCTGCTCTTTACCtgcctcagacacacacacactagcttaAGAGAGGGAATGATTGCAAGGGGTAGAGAGCTGATGAAAGACGCACATCGGGGAGACAAAAGAGCGATCGATCCATCGTCTCCTTTCCGTTCTAGTGAATTCAGTCGCCTGGCGTCTCCAGATCTGATGAAGAGGAGACAAATGTCAAGACACAAAGCAAAACGTCCCCTGGGAGCCTGGAAACGCAAAGACATCCACCCTGTTCCCCATTTTCCCTCCTGACTCCTCATTTTAAACAGGAATTATGTATTGATTTGAAAGCCCAATGGAACCACAGCAAAGATACCCACTGACAAATGTAATCAAAACCCTCACTTTCCATTGCTAAATTACTGTTTCATAGACTATACAAACCTcctttatgatgaaataatcacGATAAAGCACTTTTGTTGTTGCTCGAGAAGAGGCTTTGATTTGTAAATGAAAGAGATCTTTTATTTCTTAAATAGCAAAACAAATTCTGTTTACCCCTTTAAGGAACCAGGCAAGATGCTAATCTTGTGTAATGGAGAGTATTTGTCCATCGAgaggaaaaatatttgcataaaatcatttccatattttcttttgtttccAAGGAATTTGCAGATTGGGATCGCTCTGTTGGTTTATCGCCTCTAATCTTTCAAACTctgctgtgtttgcatgttct

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00027393 True 764 lncRNA 0.41 2 39854487 39859108

Neighbor

gene id symbol gene type direction distance location
XLOC_013569 NA coding downstream 57652 39791715 ~ 39796835 (-)
XLOC_013568 dmxl2 coding downstream 67447 39669255 ~ 39787040 (-)
XLOC_013567 cyp19a1a coding downstream 218139 39620535 ~ 39636348 (-)
XLOC_013566 BX908722.1 coding downstream 238582 39615775 ~ 39615905 (-)
XLOC_013565 BX908722.2 coding downstream 267822 39586546 ~ 39586665 (-)
XLOC_013571 NA coding upstream 505203 40364311 ~ 40452290 (-)
XLOC_013572 zgc:101040 coding upstream 620576 40479684 ~ 40481028 (-)
XLOC_013573 chrna5 coding upstream 627349 40486457 ~ 40509006 (-)
XLOC_013574 NA coding upstream 653922 40513030 ~ 40515079 (-)
XLOC_013575 NA coding upstream 662384 40521492 ~ 40522524 (-)
XLOC_013384 BX323829.1 misc downstream 20312256 19542102 ~ 19542231 (-)
XLOC_013562 NA non-coding downstream 464945 39382726 ~ 39389542 (-)
XLOC_013559 NA non-coding downstream 983900 38869403 ~ 38870587 (-)
XLOC_013588 NA non-coding upstream 1373206 41232314 ~ 41232928 (-)
XLOC_013589 NA non-coding upstream 1484698 41343806 ~ 41344821 (-)

Expression


Co-expression Network