CI01000340_09630528_09631067


Basic Information

Item Value
gene id CI01000340_09630528_09631067
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 9630528 ~ 9631363 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_09630528_09631067.mRNA
ATGCCTCTGCACTGCCGTGCCAGCCACATGTTCCTGCTCATATGCGCTCTTTCCTTATGTCTCGAGTCCGTGAGAGGCGGCACCAGCTTTCTCAGTCCTGCTCAGAAACCACAGGGTCGAAGGCCCCCACGGGTGGGCAGAAGAGATGCTGCTGATTCAGAGATCCCAGTGATTAAAGAGGATGATCAGTTCATGATGAGTGCTCCGTTCGAACTGTCCGTGTCTCTGAGTGAAGCAGAGTATGAGAAATACGGTCCTGTGCTGCAGAAGGTTCTTGTGAATCTTCTTAGTGATTCTCCATTTGGTGAGCTAAACTCTTGATCCAAACAAGTAACTATGAAAATTCACTATGAAAAATGGCGTTTAATTTCCCAGAAAAAGTCCGTATTTTTAAAGAACCCTAAAAACTAAAAGTGCTTCCTGTCAGAAAATTCTTCAAGTCACCGTTTGCTGTATTTGAATAATTTTAGTGTTCTGCAAACTAACTAATATACTAAATGTATTTTCTCGTTTTTTTTCAGAATTCTGACAAGAGCTACCAGTCCTACGAGAATCAATTCCTTATAAATCAAAAATTATTCAAAATTTAAATCATTTTCTAACAGCAATTTGACAAA

Function

NR:

description
preproghrelin

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_09630528_09631067.mRNA True 617 mRNA 0.40 3 9630528 9631363

Neighbor

gene id symbol gene type direction distance location
CI01000340_09611318_09614740 NA coding upstream 15788 9611318 ~ 9614740 (+)
CI01000340_09589824_09608037 SLC4A10, SLC4A8 coding upstream 21923 9589824 ~ 9608605 (+)
CI01000340_09364385_09394079 ITPR1A coding upstream 236003 9364385 ~ 9394525 (+)
CI01000340_09339973_09344291 ENDOU coding upstream 286135 9339911 ~ 9344393 (+)
CI01000340_09305181_09322207 SMARCC2 coding upstream 308138 9305181 ~ 9322390 (+)
CI01000340_09645797_09647452 NA coding downstream 14434 9645797 ~ 9647551 (+)
CI01000340_09649643_09655912 NA coding downstream 18280 9649643 ~ 9655912 (+)
CI01000340_09656584_09660334 NA coding downstream 25221 9656584 ~ 9660560 (+)
CI01000340_09674645_09681913 PRKCDA coding downstream 43282 9674645 ~ 9682677 (+)
CI01000340_09684020_09686723 DDI2 coding downstream 52136 9683499 ~ 9686753 (+)
G491032 NA non-coding upstream 5310 9624858 ~ 9625218 (+)
G491031 NA non-coding upstream 7487 9620240 ~ 9623041 (+)
G491023 NA non-coding upstream 54246 9576072 ~ 9576282 (+)
G491022 NA non-coding upstream 55560 9574731 ~ 9574968 (+)
G491021 NA non-coding upstream 56046 9574250 ~ 9574482 (+)
G491052 NA non-coding downstream 100995 9732358 ~ 9733035 (+)
G490914 NA non-coding downstream 110305 9741668 ~ 9742721 (+)
G490857 NA non-coding downstream 219172 9850535 ~ 9851679 (+)
G491067 NA non-coding downstream 230628 9861991 ~ 9862216 (+)
G491075 NA non-coding downstream 268545 9899908 ~ 9900145 (+)
G490839 NA other upstream 392969 9234973 ~ 9237559 (+)
G490826 NA other upstream 499131 9125184 ~ 9131397 (+)
G490645 NA other upstream 587427 9038812 ~ 9043101 (+)
G489634 NA other upstream 2929740 6694221 ~ 6700788 (+)
CI01000340_04660938_04668996 NA other upstream 4965343 4659584 ~ 4669322 (+)
G490896 NA other downstream 200110 9831473 ~ 9845052 (+)
G492194 NA other downstream 1020320 10651683 ~ 10652694 (+)
CI01000340_10781781_10785861 CAMKVA, CAMKVB, CAMKV other downstream 1152039 10781468 ~ 10787792 (+)
G492847 NA other downstream 1977743 11609106 ~ 11696961 (+)
G493617 NA other downstream 3424029 13055392 ~ 13069652 (+)

Expression


Co-expression Network