CI01000340_09684020_09686723 (DDI2)


Basic Information

Item Value
gene id CI01000340_09684020_09686723
gene name DDI2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 9683499 ~ 9686753 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_09684020_09686723.mRNA
GTATAAAAAAAATGGATACATTTATCAGTCAAATAAGCACATTTGTGACATTTACCACGTTAACTAAAAACAATTTACTTAAAAATGCCTTTTGTTTATTTTTACTTCAGTTACTTATATTTAGTTATTCACTTTAATGTTATAAATGTATTTAATTTGACATTGAATTAAATTATTTCATTCATTCATTCATTCATTCATTCAATTAATTTATCATATCAAAATGCATTGTTTTGATGTTGTATGTTGTTTCTGACTTCCTGTCTCAGTAAGCTACGACACACGTAATCGGTTTACGGCAGTGGCTAGAGAGCAGTGGAAAGGAAGTGAACGAATTCTTTATTAGCGAATTGTGTTCGCTTGTTCAGATGTTTCTCCATATGCTTAACTTTTTCATAACCAGATTTTACACAACGTTTTAACGGGACACACGTGGTCACATTTCCTGTAGCAAAACTCCGGAATAACGGCAGTTTCTGACAGTAAGAGAGAAGCAGTAACCGGGTTCGACCCCGAGCGCAATGCTGCTCACCGTGTTTTGTGCACCGAGAGACCGCTCGGAAACCACTTTCGCCCTGGAAGTGTCCCCGGAGCTTGAACTCAGGGATTTTTTGGCTCTTTGCGAACTAGAATCAGGAATACCAGCCGGGGAGATTCAGATCTCATACGCAGAGCAGCCATTACAAGATCCCACCCGAGCCCTGGGGAACTATGGGCTGAAGGATGGAGATGTGGTAGTGTTAAGACAAGCAGAGAGGTTATTAGGGCAACAACCCACAGTTCCAGGTCTGCCTCGCATCGATTTCAGTTCCATTGCTGTTCCTGGGACATCCTCAGGCCAAAACAGACAGCACCAAGCCCAGCGCCCCAATGTGACCCAATCACGGCCGCCCCAAGCCACCACTCCAGGCTCTGGCTCTGGATCAGGATCAGGCTCAGCCCTTTCTCCTCAGGGACTGGACAACCCCGCCTTGCTGCGTGACATGTTGCTGGCAAATCCACATGAGCTTTCGTTGCTGAAAGAGCGAAACCCTCCACTTGCTGAGGCTCTGCTGAGTGGAGACCTTGAGCGCTTCACCAAGGTGCTATTGGAGCAGCAGCAGGACCGAGCGCGAAGAGAGCAGGAGAGAATCAAACTGCTGACTGCAGATCCTTTTGACTTGGAAGCTCAGGCCAAGATTGAGGAAGAAATCAGACAGCACAACATTGAAGAGAATATGACCATTGCTATGGAAGAAGCACCTGAGAGTTTTGGCCAGGTGGTCATGCTATACATCAACTGCAAAGTCAATGGACACCCAGTAAAGGCTTTTGTTGACTCAGGAGCTCAGATGACGATTATGAGTCAAGCATGTGCAGAGCGATGTAATATCATGCGACTAGTGGACAGACGCTGGGCAGGCATTGCCAAAGGAGTTGGCACCCAGAAAATTATTGGCCGAGTTCATTTGGCCCAGGTGCAGATCGAAGGAGATTTCCTGCCTTGCTCTTTCTCCATTTTGGAAGATCAGCCCATGGATATGCTGCTAGGCCTTGACATGCTGAAGAGACACCAGTGCTCCATAGATCTAAAGAAAAATGTTCTCCTGATTGGGACGACGGGTACAGAGACACGTTTTCTACCTGAGGCAGAGCTGCCTGAGTGTGCCCGGCTGGCATATGGGCCAGAGGGACGAGAGGATACCCGGCCTGAGGAGATTGCAGATCGAGAACTGGCAGAGGCAATACAAAGATCTGTACAGGACAGCGGTGAGATGCATGACATATAGACCAAGAGATTGCATGGCTAACGGTTTGGA

Function

symbol description
ddi2 Predicted to enable aspartic-type endopeptidase activity and identical protein binding activity. Predicted to be involved in several processes, including cellular response to hydroxyurea; proteolysis; and regulation of DNA stability. Predicted to act upstream of or within proteolysis. Predicted to be located in chromosome and cytosol. Orthologous to several human genes including DDI2 (DNA damage inducible 1 homolog 2).

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG:

id description
K11885 DDI1; DNA damage-inducible protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_09684020_09686723.mRNA True 1799 mRNA 0.47 8 9683499 9686753

Neighbor

gene id symbol gene type direction distance location
CI01000340_09674645_09681913 PRKCDA coding upstream 822 9674645 ~ 9682677 (+)
CI01000340_09656584_09660334 NA coding upstream 22939 9656584 ~ 9660560 (+)
CI01000340_09649643_09655912 NA coding upstream 27587 9649643 ~ 9655912 (+)
CI01000340_09645797_09647452 NA coding upstream 35948 9645797 ~ 9647551 (+)
CI01000340_09630528_09631067 NA coding upstream 52136 9630528 ~ 9631363 (+)
CI01000340_09688037_09689981 NA coding downstream 1284 9688037 ~ 9690246 (+)
CI01000340_09691816_09701552 CF125, UQCC2 coding downstream 5022 9691775 ~ 9701597 (+)
CI01000340_09712859_09717865 FRS3 coding downstream 26106 9712859 ~ 9717898 (+)
CI01000340_09730645_09739635 SLC6A11A coding downstream 43771 9730524 ~ 9739635 (+)
CI01000340_09751682_09758397 ENO1B, ENO1, ENO1A, ENOA coding downstream 64929 9751682 ~ 9758677 (+)
G491032 NA non-coding upstream 58281 9624858 ~ 9625218 (+)
G491031 NA non-coding upstream 60458 9620240 ~ 9623041 (+)
G491023 NA non-coding upstream 107217 9576072 ~ 9576282 (+)
G491022 NA non-coding upstream 108531 9574731 ~ 9574968 (+)
G491021 NA non-coding upstream 109017 9574250 ~ 9574482 (+)
G491052 NA non-coding downstream 45605 9732358 ~ 9733035 (+)
G490914 NA non-coding downstream 54915 9741668 ~ 9742721 (+)
G490857 NA non-coding downstream 163782 9850535 ~ 9851679 (+)
G491067 NA non-coding downstream 175238 9861991 ~ 9862216 (+)
G491075 NA non-coding downstream 213155 9899908 ~ 9900145 (+)
G490839 NA other upstream 445940 9234973 ~ 9237559 (+)
G490826 NA other upstream 552102 9125184 ~ 9131397 (+)
G490645 NA other upstream 640398 9038812 ~ 9043101 (+)
G489634 NA other upstream 2982711 6694221 ~ 6700788 (+)
CI01000340_04660938_04668996 NA other upstream 5018314 4659584 ~ 4669322 (+)
G490896 NA other downstream 144720 9831473 ~ 9845052 (+)
G492194 NA other downstream 964930 10651683 ~ 10652694 (+)
CI01000340_10781781_10785861 CAMKVA, CAMKVB, CAMKV other downstream 1096649 10781468 ~ 10787792 (+)
G492847 NA other downstream 1922353 11609106 ~ 11696961 (+)
G493617 NA other downstream 3368639 13055392 ~ 13069652 (+)

Expression


Co-expression Network