CI01000340_09792107_09793316


Basic Information

Item Value
gene id CI01000340_09792107_09793316
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 9792107 ~ 9793808 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_09792107_09793316.mRNA
TTGAAGGTTATTTAAACACTGTGAAAGAGGGTATAACATGTCAATTTGAGACTATGCAGAGCCAAACACAAATAGAAATGGAAGACAGAGAAGTTAAGAGCAGTCTGGCTGCAAAAGAGTTGAGCTCAAACATGCTTAACCTCCAACGGGATCTGGAACATCTAAAAGTAGAGCAGAGCAAGGAGCAGGGCATGCTGGGAAAAATTCTTTCTCAGCTTACCACTTTGATTTCTATTCACAAGCCAATAGCAGGACCTAGCTCTGCCAGAATGATTGACAGTGAAGTCCAAACATCACCTGGTCTGTTAGAGAGGTTCTGTGTCATTTCAAATGAGAAACACCAAGAGAGCACGATGATGTGCAATAGGCCTGCCATTTATTCAGGAAAAGAAATAGAACAGAACCAGTGTCCACTTACCACACAGAAGACACAAAACAGAAATGCACACGCTCTGCCTGTACAAAAACAGCAGACAGCAGTCACACAGGTGGTTTCCCATGATGCTTCACAGAGATTATGGTGCACACAGTTAGTTGAGACCACATCTTCAAGCCCACTTGTGGATACTCAATCTACTGCATCCATAGAGGAGCATGAAAAACATTATGTAGACAGACACCTGGTGCCTGAAAAAACATGGAACAGATTGAGCACTGATGCGTTGCCACCTCTGAAAGTACCTAGGAGGCGCCAAAAAGCCCTGAATTATAGGGGGAAAAAGAGAGCCTTGGTTCTCCCACAAAGACAACCACTGAGAAAAAAAGGAGCAGTGAAATTTTCAAAGGACAGCCCACAGAATGAAGACTTTCAGTGTGAACAAAAAGACAGAGTACCTTTGTCTTCTCTTTGTGACAACTGGAAAATGACCAACAAATCTGTTGCAGAGAATCACTTAAAACTACAGCAGCAAGCCACTGTAGCACCAGTCAGTAGGTGTGTAGCTGAACAACCACTAAACCCCTTCAGTTTGTGGTCTGAGGACACAGAGAGTTCCCAAATGATGGTGGAATACAAGATGGCTGAGTGGGAAAATGTGGTGCCTGAACCTAAAGCTAGTGTCGTAGTAGGAGAAGGTGGCCTGTGGCAGCTCTTTGACTTTACTAATGACTCAGAATAAAATGCAGAATACCTCCATACTGTATGCTGATTACACTTAGATTCTATGTTGAGTTTTTTTAGTAAGAACTCGAAATTGCCTGTGAACATGCAAACCTTGTTATCTAACCACTTTTCTTGCTATAGACATTATCTGTTCCTTTTCTGTTGCTGTTCCTTGTTGATTCTTTTTTGAACATTGGTACATATGGATGGTATAAAAACTGTAAGACAGTTTGGCAGACTTAACTGCCTCTAAAAGCATTGTTCTAGTTTACTTGTACCATATGACTCTAAAGCAATAACATTCAAGCACATTCTGTAATTCAGACATGTCATGTTCTTTTTCACAAACCATATTCCAGAAGTTTGTGAATAATTTGTTTTGGCCTTGCAAATATTTTAGCAACATCAAAAGGTACATAATCATTTACAAATATATATTCAATTTTGTTTGCATTTGGAACATGACACAGATTTAGCCTTGTAAGTTGGACAGATAATTATATGTTTA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_09792107_09793316.mRNA True 1610 mRNA 0.40 2 9792107 9793808

Neighbor

gene id symbol gene type direction distance location
CI01000340_09760651_09770907 REREB coding upstream 21200 9760651 ~ 9770907 (+)
CI01000340_09751682_09758397 ENO1B, ENO1, ENO1A, ENOA coding upstream 33430 9751682 ~ 9758677 (+)
CI01000340_09730645_09739635 SLC6A11A coding upstream 52472 9730524 ~ 9739635 (+)
CI01000340_09712859_09717865 FRS3 coding upstream 74209 9712859 ~ 9717898 (+)
CI01000340_09691816_09701552 CF125, UQCC2 coding upstream 90510 9691775 ~ 9701597 (+)
CI01000340_09800166_09810314 SLC26A6L coding downstream 5679 9799487 ~ 9810368 (+)
CI01000340_09854550_09859638 NA coding downstream 60742 9854550 ~ 9859905 (+)
CI01000340_09867373_09873132 GATA2B coding downstream 71897 9865705 ~ 9873388 (+)
CI01000340_09890498_09895948 RUVB1, RUVBL1.S, RUVBL1 coding downstream 96690 9890498 ~ 9896271 (+)
CI01000340_09905529_09906314 NA coding downstream 111721 9905529 ~ 9906519 (+)
G490914 NA non-coding upstream 49386 9741668 ~ 9742721 (+)
G491052 NA non-coding upstream 59072 9732358 ~ 9733035 (+)
G491032 NA non-coding upstream 166889 9624858 ~ 9625218 (+)
G491031 NA non-coding upstream 169066 9620240 ~ 9623041 (+)
G491023 NA non-coding upstream 215825 9576072 ~ 9576282 (+)
G490857 NA non-coding downstream 56727 9850535 ~ 9851679 (+)
G491067 NA non-coding downstream 68183 9861991 ~ 9862216 (+)
G491075 NA non-coding downstream 106100 9899908 ~ 9900145 (+)
G491080 NA non-coding downstream 133006 9926814 ~ 9927267 (+)
G491079 NA non-coding downstream 135574 9929382 ~ 9929697 (+)
G490839 NA other upstream 554548 9234973 ~ 9237559 (+)
G490826 NA other upstream 660710 9125184 ~ 9131397 (+)
G490645 NA other upstream 749006 9038812 ~ 9043101 (+)
G489634 NA other upstream 3091319 6694221 ~ 6700788 (+)
CI01000340_04660938_04668996 NA other upstream 5126922 4659584 ~ 4669322 (+)
G490896 NA other downstream 37665 9831473 ~ 9845052 (+)
G492194 NA other downstream 857875 10651683 ~ 10652694 (+)
CI01000340_10781781_10785861 CAMKVA, CAMKVB, CAMKV other downstream 989594 10781468 ~ 10787792 (+)
G492847 NA other downstream 1815298 11609106 ~ 11696961 (+)
G493617 NA other downstream 3261584 13055392 ~ 13069652 (+)

Expression


Co-expression Network