CI01000340_09854550_09859638


Basic Information

Item Value
gene id CI01000340_09854550_09859638
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 9854550 ~ 9859905 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_09854550_09859638.mRNA
GACACACACAGAGTGAAGAGGCCGAGTTCAAACCTGATGAGGATGTTTATCTTTCTATTTGAATGTGATCGTATGAGAGTATGTGATTATTTGTTGATTCTAGATGGATTTGATGGGAAAAATTCATGCAATCAGAGGGACATCCTGGTGGCCGGGCCCCCCAACAGCAAATGTGAGGGAAGCTGCAGTGCAACAGCATCACCCCCTAAAATACATCACCCTCAGGACTCACGGCTCAGAAAGACTCCAGAGAACCGCAAAAACGCACAGGTGTCTGATACATCTGAACGTCTCATCCAGCTGCAGCGCTGTATGCTGCAACATGAATCAGTGGCTGTGAGTCAGGGAGATGGGTCTGATTCACTAGTAGCCTTTCTGGCTCTTATGGCAGCAGTGCTGACAGAATGTGACCTCCACTGCCATAAAAGTGTAGTGGGCAAAAATGGGGAGAAAGACTTGCTGCTGTTGCTGAAAAGTATCACGCATTCTAAACCTAATGGCCTCAAACCAAGGACTCCTACAGGGCTTTACCCTCAAGACTGTCATGAGATCTACCAAATGGGAATCAAAGAGAATGGGATCTACACCATACAGCCAGATCCAAAGCGGCCCGCATTAGAGGCTGTGTGTGACATGGTTTCAGCTGGTGGGGGATGGACAGTATTCCAGCGCCGGTTTGATGGACAAATTGACTTTAACCGAACCTGGCAGGAGTACCGTGATGGATTTGGATCCCCGCAGACAGAGCACTGGTTAGGGAACGCAGTTCTATCTGCGTTAACCGCAAGTGGACATCACACGCTCCGCATCACTCTCCAAGACTGGCACGAACAGACACGTCATGCAAACTATAACACTTTTAAAGTGGCAGGAGAAAACCAGAGGTTCCGCCTAACTGCTCGAGATTACCATGGCGATGCTGGCAATGCATTCAGTTATAGCAAACAGTACAATCATGATGGCAGAGCTTTCAGTACATACGACCGAGATCATGACCGCTACGCTGCTGGTAACTGTGCCCGTTACTATGGTGCAGGCTGGTGGTTTGATTCCTGTTTGGCCGCTAACCTCAATGGACGCTACTACCACGGGCGTTACAGCGGCATCACGGATGGCATCTACTGGGGCACCTGGTACATCCTGACTGACTATCGCACAGGGGAAAGATACTCATTTAAGAGCATTGAAATGAAAATAAGACCAAGGCGGAGCTAAGAATTTCTAATTTTTAAAATGACAAATCCTTGTTGTAGATGTTGACATGTAATCATACTCTTGCACTGTGCATTTCCTTTCAATAATGGCTTGTAATTTTATAACCTGAACCTGCCATTATATTGAACTTGAGATATTTAGATAATTGTATGATATGTGAACACATTTATAAACATTTATTTTAAAATAAATGTCAGATGCCAAATTTTAAGCAGTTTCTCTGTGTATGTTATCAATTTTCAGTTACTGTTGTACTATGGGACAAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_09854550_09859638.mRNA True 1482 mRNA 0.45 7 9854550 9859905

Neighbor

gene id symbol gene type direction distance location
CI01000340_09800166_09810314 SLC26A6L coding upstream 44182 9799487 ~ 9810368 (+)
CI01000340_09792107_09793316 NA coding upstream 60742 9792107 ~ 9793808 (+)
CI01000340_09760651_09770907 REREB coding upstream 83643 9760651 ~ 9770907 (+)
CI01000340_09751682_09758397 ENO1B, ENO1, ENO1A, ENOA coding upstream 95873 9751682 ~ 9758677 (+)
CI01000340_09730645_09739635 SLC6A11A coding upstream 114915 9730524 ~ 9739635 (+)
CI01000340_09867373_09873132 GATA2B coding downstream 5800 9865705 ~ 9873388 (+)
CI01000340_09890498_09895948 RUVB1, RUVBL1.S, RUVBL1 coding downstream 30593 9890498 ~ 9896271 (+)
CI01000340_09905529_09906314 NA coding downstream 45624 9905529 ~ 9906519 (+)
CI01000340_09935375_09945285 EIF4ENIF1 coding downstream 75470 9935319 ~ 9945285 (+)
CI01000340_09948209_09955176 PATZ1 coding downstream 87865 9947770 ~ 9955449 (+)
G490857 NA non-coding upstream 2871 9850535 ~ 9851679 (+)
G490914 NA non-coding upstream 111829 9741668 ~ 9742721 (+)
G491052 NA non-coding upstream 121515 9732358 ~ 9733035 (+)
G491032 NA non-coding upstream 229332 9624858 ~ 9625218 (+)
G491031 NA non-coding upstream 231509 9620240 ~ 9623041 (+)
G491067 NA non-coding downstream 2086 9861991 ~ 9862216 (+)
G491075 NA non-coding downstream 40003 9899908 ~ 9900145 (+)
G491080 NA non-coding downstream 66909 9926814 ~ 9927267 (+)
G491079 NA non-coding downstream 69477 9929382 ~ 9929697 (+)
G490896 NA other upstream 9498 9831473 ~ 9845052 (+)
G490839 NA other upstream 616991 9234973 ~ 9237559 (+)
G490826 NA other upstream 723153 9125184 ~ 9131397 (+)
G490645 NA other upstream 811449 9038812 ~ 9043101 (+)
G489634 NA other upstream 3153762 6694221 ~ 6700788 (+)
G492194 NA other downstream 791778 10651683 ~ 10652694 (+)
CI01000340_10781781_10785861 CAMKVA, CAMKVB, CAMKV other downstream 923497 10781468 ~ 10787792 (+)
G492847 NA other downstream 1749201 11609106 ~ 11696961 (+)
G493617 NA other downstream 3195487 13055392 ~ 13069652 (+)
G493740 NA other downstream 3655322 13515227 ~ 13517111 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_032236 si:ch211-157b11.8 coding NC_007117.7 CM002890.2 40775800 ~ 40783641 (+)