CI01000340_09905529_09906314


Basic Information

Item Value
gene id CI01000340_09905529_09906314
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 9905529 ~ 9906519 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_09905529_09906314.mRNA
ATGATTGCCTCAGAAATGCTCATTTCGGCCGCACAGAAGTTATTGTGTCCTCGAAAGAAACGTTTATCTCCGTCTACATGTCTTGATGTGACTGTTCAAATAATGGCTGTGGATCTGGGCATCAAACCAGCGCTGTTGTACGACAGTAATGCAGCATCTCCAGAACAGCTTCACCTGTACCTCAGTTCACTACAGGAGTCTGGAGTTGTAACCAGTCCACTACGGATACTGTCCATTGATGACAACACATTCATTTTTAACCCTGCCACTGTTCAGTCCCACCTGGATGAACTGCTCCAAAGCAAAAGTCTCCTTCTGATTGATGCATGTCCCTCAAGAAAACAACCTGTCTTGGCTGGCTTGGAAAAGAGAACTGAAGATATGATCAGAAGTCTTTCAGGATTCTTCATGAATGAGCTGGACGAAGGCTCCTCAGTGATTATGTTGGGAGAGGAGTTGTATAATGACTGGAACTTGTGTACTCTCTTTGGAATCTTGTTAGGTTATCCAGCCTCCTACTGGTTTGACCAAACTAAGGGATTTGGGAACTGTCTGTGTATGACACCACTGGTGGTGTGCACTGTTTGGGTCACGTGGCAAATACATGACATAAATCATCGCTGTTGTCTTTATTCATTTAGTGTTCCTGAGGAGCTGTGGTCAGAAGTACAAAGTCATATGCAACGATGGACGGAGCATTTGAGAGAGAGATTTAACAAACAGACAGTTCTGACTGATCTCTGCTTTTCTAGGGATGCGGTCACTTTGCCCTCTGTGACCCTTTGAATAAACTTGATTTATGTTTCTTTTTAGTATTGTTATTTTGTCATTGTTACAATTGTAAATATGTATTTTCTCAGAAACACATTACATTAATGGTTTATTCGTTTAATTTCTTTTTCCACGCACCACATATTTTCAGTATCATTTATGCATTTCATAGATTTGGTACCAAACAACATATAATAATGTGTGCATAGTGTTGAAAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_09905529_09906314.mRNA True 991 mRNA 0.41 1 9905529 9906519

Neighbor

gene id symbol gene type direction distance location
CI01000340_09890498_09895948 RUVB1, RUVBL1.S, RUVBL1 coding upstream 9258 9890498 ~ 9896271 (+)
CI01000340_09867373_09873132 GATA2B coding upstream 32141 9865705 ~ 9873388 (+)
CI01000340_09854550_09859638 NA coding upstream 45624 9854550 ~ 9859905 (+)
CI01000340_09800166_09810314 SLC26A6L coding upstream 95161 9799487 ~ 9810368 (+)
CI01000340_09792107_09793316 NA coding upstream 111721 9792107 ~ 9793808 (+)
CI01000340_09935375_09945285 EIF4ENIF1 coding downstream 28856 9935319 ~ 9945285 (+)
CI01000340_09948209_09955176 PATZ1 coding downstream 41251 9947770 ~ 9955449 (+)
CI01000340_09994916_10004762 NA coding downstream 88397 9994916 ~ 10005153 (+)
CI01000340_10038089_10047331 FKBP5 coding downstream 131514 10038033 ~ 10048382 (+)
CI01000340_10066847_10072213 SLC6A13L coding downstream 158570 10065089 ~ 10072300 (+)
G491075 NA non-coding upstream 5384 9899908 ~ 9900145 (+)
G491067 NA non-coding upstream 43313 9861991 ~ 9862216 (+)
G490857 NA non-coding upstream 53850 9850535 ~ 9851679 (+)
G490914 NA non-coding upstream 162808 9741668 ~ 9742721 (+)
G491052 NA non-coding upstream 172494 9732358 ~ 9733035 (+)
G491080 NA non-coding downstream 20295 9926814 ~ 9927267 (+)
G491079 NA non-coding downstream 22863 9929382 ~ 9929697 (+)
G490870 NA non-coding downstream 39671 9946190 ~ 9946958 (+)
G490880 NA non-coding downstream 101784 10008303 ~ 10020235 (+)
G490896 NA other upstream 60477 9831473 ~ 9845052 (+)
G490839 NA other upstream 667970 9234973 ~ 9237559 (+)
G490826 NA other upstream 774132 9125184 ~ 9131397 (+)
G490645 NA other upstream 862428 9038812 ~ 9043101 (+)
G489634 NA other upstream 3204741 6694221 ~ 6700788 (+)
G492194 NA other downstream 745164 10651683 ~ 10652694 (+)
CI01000340_10781781_10785861 CAMKVA, CAMKVB, CAMKV other downstream 876883 10781468 ~ 10787792 (+)
G492847 NA other downstream 1702587 11609106 ~ 11696961 (+)
G493617 NA other downstream 3148873 13055392 ~ 13069652 (+)
G493740 NA other downstream 3608708 13515227 ~ 13517111 (+)

Expression


Co-expression Network