XLOC_013574


Basic Information

Item Value
gene id XLOC_013574
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 40513030 ~ 40515079 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00026987
AACAGATCTTTGAGGATTGAGACAGAGCTTGAACAAACAGAAGTGATTTATGAAGTATCACCCAAACCTGATACTGCTGGTACTGATGAAATACGAAGCATTGTCTGGTaagccaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacagcaacaaaaatgtTTTGACTGACTCCAAGTTTATAAATGTATAAGCCTTTCATTAATCATGTCCTATATaaagtttatatttttgtttctttttttttattgctctaAATCAACATCCATGATGTCTCAGCGCTGCCTCAGAGAATGACTTCTCTGATTACAGTAAGTTTGCTCTgtaaaagatgaatgaatgatgaattttTTGCAAtcttgaaaaaacaaacaaaaaacataatcaTCATGTATTTCTCC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00026987 True 415 lncRNA 0.33 2 40513030 40515079

Neighbor

gene id symbol gene type direction distance location
XLOC_013573 chrna5 coding downstream 4024 40486457 ~ 40509006 (-)
XLOC_013572 zgc:101040 coding downstream 32002 40479684 ~ 40481028 (-)
XLOC_013571 NA coding downstream 60740 40364311 ~ 40452290 (-)
XLOC_013570 NA coding downstream 653922 39854487 ~ 39859108 (-)
XLOC_013569 NA coding downstream 716195 39791715 ~ 39796835 (-)
XLOC_013575 NA coding upstream 6413 40521492 ~ 40522524 (-)
XLOC_013576 si:ch211-132b12.7 coding upstream 153536 40668615 ~ 40684792 (-)
XLOC_013577 cntd2 coding upstream 183471 40698550 ~ 40708537 (-)
XLOC_013578 akt2 coding upstream 196109 40711188 ~ 40753583 (-)
XLOC_013579 vaspb coding upstream 246834 40761913 ~ 40856354 (-)
XLOC_013384 BX323829.1 misc downstream 20970799 19542102 ~ 19542231 (-)
XLOC_013566 BX908722.1 non-coding downstream 897125 39615775 ~ 39615905 (-)
XLOC_013565 BX908722.2 non-coding downstream 926365 39586546 ~ 39586665 (-)
XLOC_013588 NA non-coding upstream 717235 41232314 ~ 41232928 (-)
XLOC_013589 NA non-coding upstream 828727 41343806 ~ 41344821 (-)
XLOC_013590 NA non-coding upstream 835910 41350989 ~ 41351483 (-)
XLOC_013592 NA non-coding upstream 1027463 41542542 ~ 41544182 (-)

Expression


Co-expression Network