CI01000340_10081602_10083643


Basic Information

Item Value
gene id CI01000340_10081602_10083643
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 10081602 ~ 10083867 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_10081602_10083643.mRNA
TATTCATGGGAACCTACGTGATGCCAGCTACAAGAGGTCGACTAGAGTTCAAACATGTAGGTTACATGGCTCTAGGTCCATTTGGCTGTGTAATGGAGGGGTTTTTCGCAACAATTGGAGGTCAAGTCTCTCTTTGGTCTCTGGTGGTGCTTGCCATTGAGAGGTACACCATGGTGTGCAAGCCAATGGGGAGCTTCAATTTTTCTTCAAACCATGCGAGAGACAGAGGTGTCCTCGGTGTCTCCTGCATAGATTAATCCTCCTATCTGCCTACTCTGCGCATCTTAATGTTGACCATCACTAAATGGGACTTTGTACTCTCTGTAACTGTTATTTTTTCAAGACCATACATGTCCATTTTATGGCATTTTATCAATAGGATTCAAGAATGACTGGTTCTGAGGTTGAAGAAAAATATTTATGTTATATTTACTGCATTTATGGATTAATCTTCTCCTCTGATTAGGTGGAATTTTCTTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_10081602_10083643.mRNA True 481 mRNA 0.41 3 10081602 10083867

Neighbor

gene id symbol gene type direction distance location
CI01000340_10066847_10072213 SLC6A13L coding upstream 9302 10065089 ~ 10072300 (+)
CI01000340_10038089_10047331 FKBP5 coding upstream 33220 10038033 ~ 10048382 (+)
CI01000340_09994916_10004762 NA coding upstream 76449 9994916 ~ 10005153 (+)
CI01000340_09948209_09955176 PATZ1 coding upstream 126153 9947770 ~ 9955449 (+)
CI01000340_09935375_09945285 EIF4ENIF1 coding upstream 136317 9935319 ~ 9945285 (+)
CI01000340_10085575_10089504 OPN1MW4, OPN1MW1, OPN1MW3, OPN1MW2 coding downstream 1450 10085317 ~ 10089792 (+)
CI01000340_10097098_10098784 OPN1MW4, OPN1MW1, OPN1MW3, OPN1MW2 coding downstream 12613 10096480 ~ 10099068 (+)
CI01000340_10103264_10104931 OPN1MW4, OPN1MW1, OPN1MW3, OPN1MW2 coding downstream 18404 10102271 ~ 10105194 (+)
CI01000340_10137511_10221465 CADPSB, CADPS coding downstream 53644 10137511 ~ 10221465 (+)
CI01000340_10223734_10225662 RSG1 coding downstream 139867 10223734 ~ 10226212 (+)
G490915 NA non-coding upstream 49277 10029238 ~ 10032325 (+)
G490875 NA non-coding upstream 53481 10021887 ~ 10028121 (+)
G490880 NA non-coding upstream 61367 10008303 ~ 10020235 (+)
G490870 NA non-coding upstream 134644 9946190 ~ 9946958 (+)
G491108 NA non-coding downstream 32289 10116156 ~ 10119206 (+)
G492101 NA non-coding downstream 384333 10468200 ~ 10470924 (+)
G492136 NA non-coding downstream 392274 10476141 ~ 10476566 (+)
G492137 NA non-coding downstream 393590 10477457 ~ 10477664 (+)
G492139 NA non-coding downstream 394723 10478590 ~ 10478848 (+)
G490896 NA other upstream 236550 9831473 ~ 9845052 (+)
G490839 NA other upstream 844043 9234973 ~ 9237559 (+)
G490826 NA other upstream 950205 9125184 ~ 9131397 (+)
G490645 NA other upstream 1038501 9038812 ~ 9043101 (+)
G489634 NA other upstream 3380814 6694221 ~ 6700788 (+)
G492194 NA other downstream 567816 10651683 ~ 10652694 (+)
CI01000340_10781781_10785861 CAMKVA, CAMKVB, CAMKV other downstream 699535 10781468 ~ 10787792 (+)
G492847 NA other downstream 1525239 11609106 ~ 11696961 (+)
G493617 NA other downstream 2971525 13055392 ~ 13069652 (+)
G493740 NA other downstream 3431360 13515227 ~ 13517111 (+)

Expression


Co-expression Network