XLOC_013575


Basic Information

Item Value
gene id XLOC_013575
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 40521492 ~ 40522524 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00026988
tatatatataaataaacttttttttgtttttagataaaaggtcttaatgtaaacaacttatataaaaatacatcacataatgtaaaaaagctgtcattaaataaaaatgtcaataactcaattttgacaatgTCAGACAGAACCTTTTAATGCTAAGGTGACCAATAGCCTAAGATAGAATTCTTAgaactgttttgtgtgtgtgcgtttgtgcatgcatgtttcCGCTTTAATAATTCCCTTACAGCATGATTATTAGAGATGCTCTACCTCAGTGAAAGCACTGCCCTTTTCTCTGTTCTGTTTAGTGTACTGACTTTGTAACAGCATATTGGATGCAAACCAAAAGAAACTAAATGATCTTGTGGTGTGTAAAGACATATTGATCAGCAGTCATGGTTAGTGTGCTTCTCCTTGCATatATGTCAGTGAATCTTTTCATTCCGACTCAAGGTCAAAACATTCAACGAGCTAAGATTTTCAGTCAAAACAAAGAAGTGCCAGAAGGGGGAAAACTGGAGGTTAAGTGCAGTGCGTTTGGTCTGGCAACAAAGGCAGTTTATATCTATCTGTGTACAGACGGTATCGCTGTAGATGTGCAATATGGACAAGATGTCTCCTTTAAAATAGAACGTGTGGAAATAAACCAATCTGGCAATTACAGCTGTGTGTTTTCAGAAGAGAAGTTGGAGATAACTAAAGTTATGGGATATGGTCAAAATAATATCTTCATCAATGTGACCGGTAGGATATTCTGACATTTCTGAATAAATTTGTGAGCCTGAACTACAAAACCAGCATTAAGTTACACACATATTTGTACACTATAAAAAacatatgatcaattagtcacgA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00026988 True 855 lncRNA 0.35 3 40521492 40522524

Neighbor

gene id symbol gene type direction distance location
XLOC_013574 NA coding downstream 6413 40513030 ~ 40515079 (-)
XLOC_013573 chrna5 coding downstream 12486 40486457 ~ 40509006 (-)
XLOC_013572 zgc:101040 coding downstream 40464 40479684 ~ 40481028 (-)
XLOC_013571 NA coding downstream 69202 40364311 ~ 40452290 (-)
XLOC_013570 NA coding downstream 662384 39854487 ~ 39859108 (-)
XLOC_013576 si:ch211-132b12.7 coding upstream 146091 40668615 ~ 40684792 (-)
XLOC_013577 cntd2 coding upstream 176026 40698550 ~ 40708537 (-)
XLOC_013578 akt2 coding upstream 188664 40711188 ~ 40753583 (-)
XLOC_013579 vaspb coding upstream 239389 40761913 ~ 40856354 (-)
XLOC_013580 snrpd2 coding upstream 353349 40875873 ~ 40884087 (-)
XLOC_013384 BX323829.1 misc downstream 20979261 19542102 ~ 19542231 (-)
XLOC_013569 NA non-coding downstream 724657 39791715 ~ 39796835 (-)
XLOC_013566 BX908722.1 non-coding downstream 905587 39615775 ~ 39615905 (-)
XLOC_013588 NA non-coding upstream 709790 41232314 ~ 41232928 (-)
XLOC_013589 NA non-coding upstream 821282 41343806 ~ 41344821 (-)
XLOC_013590 NA non-coding upstream 828465 41350989 ~ 41351483 (-)
XLOC_013592 NA non-coding upstream 1020018 41542542 ~ 41544182 (-)
XLOC_013598 NA non-coding upstream 1938364 42460888 ~ 42606669 (-)

Expression


Co-expression Network