CI01000340_10357202_10357606


Basic Information

Item Value
gene id CI01000340_10357202_10357606
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 10356758 ~ 10359856 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_10357202_10357606.mRNA
ATGCCCCGGTTTGCCCTCACCAGCACAGGTAGCTTCATCGCATCACGGGCTACATGGTTCCAGGTTTCTCGCCCGAGTTTGCGGAGGAAGCTGCAGCATTGCTTGCGTTGTTTGGAAAGATCTTCTCTGTGGGGGTCACGGCAGGGCTTCCCACCCCAGAGGAGCTGGAGCTGCTGGAGCGATGCTGTGTGGGCGGGGGTCGCACGGGTCTCATAGGTGGAGGTCTGAGCTGGGCTCCGGCCAATCGGGCGGACAGCGCCGGTTTAAAGGTTGTCATCATCTCGGAGGTGGAGCTGCTGCTGCGCCTCAGGGCCGCGTCCGGGTCTCGGATCATGATGGTGTGTAAGGGGCTCGCTGGCTCTGAGCTCACAGGGTTTTTGAGCGGTTCTAACGTATCCAGAACTACGTCGGGAGCTTGTTTGGCCGTGTTCTGGCGTTCCAATTCACGGAGCTCATGAAGTGCAGTGTTCATTGTCTTCTCAATGTCCTGTAACAAAAATATTGTTCACTTTTTACACTGTTGATTTTGTTTTAGTCATATTTTTTTCTTTTGATGAAAATATTCTTTAAAAAGAAATTAATTACAAAACCTTTTTTTCATTTTACTCAAAATGGCATCTAATTTTATTTGAAGAAAATAACATTTAAAATTAAACCAAATGTTCAAGCATTTTTTTCAAAACCTAGCTGAACAGTATGTTTTAATCAGAATTGTTGAAAAAGAAATGAATGACAAAATATTGACTGAATTTAATAATTTTTCACTTTACAGTAAAATGGCATCTAATTTTAGCTGATGAAAATAACATTTAAAATTAAACCAAATTTAGGCATTTTGTTCATTACCTAGTTACCTAGTTTTTGTCAACAGTATGTTTTAATTAAAACTGTTGAAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_10357202_10357606.mRNA False 902 mRNA 0.42 1 10356758 10357659

Neighbor

gene id symbol gene type direction distance location
CI01000340_10270796_10271185 NA coding downstream 85489 10270430 ~ 10271269 (-)
CI01000340_10258762_10264352 NA coding downstream 91133 10258553 ~ 10265625 (-)
CI01000340_10117381_10122090 SYNPR coding downstream 234668 10116722 ~ 10122090 (-)
CI01000340_10051115_10063764 SLC6A13 coding downstream 292521 10050524 ~ 10064237 (-)
CI01000340_10025958_10028902 SRSF3 coding downstream 327169 10025656 ~ 10029589 (-)
CI01000340_10468562_10470670 CAV3 coding upstream 110404 10468063 ~ 10472083 (-)
CI01000340_10473924_10477962 NA coding upstream 116210 10473869 ~ 10479040 (-)
CI01000340_10485958_10487241 NA coding upstream 128266 10485925 ~ 10487330 (-)
CI01000340_10497000_10501726 PARP3 coding upstream 138977 10496636 ~ 10502577 (-)
CI01000340_10504461_10536413 GRM2A, GRM2 coding upstream 146694 10504353 ~ 10537693 (-)
G492047 NA non-coding downstream 2809 10350057 ~ 10353949 (-)
G492050 NA non-coding downstream 16827 10329861 ~ 10339931 (-)
G492037 NA non-coding downstream 120481 10235847 ~ 10236277 (-)
G491908 NA non-coding downstream 133936 10137245 ~ 10222822 (-)
G492020 NA non-coding downstream 227498 10129060 ~ 10129260 (-)
G492343 NA non-coding upstream 321659 10679318 ~ 10679596 (-)
G492364 NA non-coding upstream 395069 10752728 ~ 10752946 (-)
G492371 NA non-coding upstream 423724 10781383 ~ 10784905 (-)
G492381 NA non-coding upstream 430308 10787967 ~ 10788183 (-)
G491712 NA other downstream 1557181 8799201 ~ 8799577 (-)
G489511 NA other downstream 4029386 6320457 ~ 6327372 (-)
CI01000340_06095704_06194498 MAST2 other downstream 4136116 6095704 ~ 6194501 (-)
CI01000340_05321995_05329778 ATG4C other downstream 5031614 5320753 ~ 5330215 (-)
G493109 NA other upstream 1316087 11673746 ~ 11677994 (-)
G493266 NA other upstream 1709518 12067177 ~ 12116900 (-)
CI01000340_12577571_12625562 PTPRG, PTPRGA, CA16B other upstream 2254557 12577435 ~ 12625758 (-)
CI01000340_14318434_14336130 NA other upstream 3855689 14318365 ~ 14336258 (-)
CI01000340_14547725_14551493 NA other upstream 4189340 14546999 ~ 14552983 (-)

Expression


Co-expression Network