XLOC_013577 (cntd2)


Basic Information

Item Value
gene id XLOC_013577
gene name cntd2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 40698550 ~ 40708537 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00026708
TGTCAATTAGCTAACTCTACATGTCAGTGTACAGCTGCAGGTTCGGCGCATGCAGGTAGCTGCAGTGTCCAGGTGAATCATGGCTCTGACTGGGTTTTGTGGTTCCAGGCAACTGTTGGACCGCCATATGACTGAGGACAGACAAGTGCCACTGCGGACGTGGGCAAACTCCTGTGTTCTGAAGGAGCGCAGGGTGTTTGCTGAGGGAGAGGAGGTTGGTTCAGGACAGCACTACAAACCCGCACAGGAGAGTAGATGGGTACAAAGACTTCCCATTTCTGCAGAGGATGGGATCATAATGGACTACGCTCCGCAGGGTGAACCAACATCTTCAGATGTCTATGAAGAGGAAGCCTTGCTGAAGTACCTGAACAGGTTGCCTGGTCCACTCAGTTTTCAAGAGCTGATGCCTGGACTTTTGCGCAGAGaggtggaagtagccatcagtaaACTCGGCCTTCTTTTTGATAAAACCTACGCATGGGACATCTTTTCAGACATGATGAGAAGCCAGCTACTATGTACTCTCCCAAACGCTGACCTGCCTAAGCCTTTCACTGACACCACAAGAGCCATTTTGGTGGACTGGCTCATTCAAGTCCATGAAGTGTTTCAGTTCTCAGAGGAAACGCTTTATCTGACAGTGCACTTGTTGAATCGAGCACTCCGGCTCATCAAGGTGTCCATCTCCGGCCTGCAGTTGTTGGGTGTGGTTTGCCTCTTTCTGGCTGCTAAAAGAGAGGAATGTCTTTTACCAGAGGTGTCCGAGCTCTGCTACTTGATGGAGAACGCCTACAGTAAGAAACAGCTGCTGCGGATGGAGAGGAGAGTTTTAATTGGTCTCAAGTTTGACCTCTATCACTGTCCGCCACTTCATTTTCTTCTCATCTCTGCCTCCATCGCACGCTGCAGTGACAAGGTGGTCTGGATGGCACGATACCTGTTGGAGCTGTCGCTTCTTGAGGGTCGGTGTGTGGTCTATCTGCCTGCTCAGCTGGCTGGTGCTGCCCTCCGTCTGGCCCGCAAGATTCTCCAGGAAGCTGCTGCTCCTGAGGCAGAAATGGCCTGGTGCATCGCCTCCAGTATCCACATAGGAAGTGAAGCAGTTCTCCTCAGTATAATGCAGATCATGGCCATAGCAGCAGCAAGAGCACAAACTCGTGAGACCCGGGCCACGTTCATAAAGTTCTCCACCGTACAGACTCTCCATGTCAGCATGCACCCTGCCCTGAAGGCGGCCCCTGGCCTACTGGGTTTGTCGTGCCCTCAGACATGATGCTCTATCAACACCAATGAAGCCAAACGGGGCTGGATGTGTTCAGGATGGCTGAACAAGTGCTGCTGCTCTGGGCAATGGAGgagagggaggaaaaaaaaaaaagcagaatatGGCCAGACAGGAGTGTTGCGTTTTTCACTGGATATCAGTCAACAACTACATGCCTCCACTGGAAAGCTGCCTGCACTTTGTGGACTGAATtgttttctgtaatgttttaTGGTAATCTTAGGTCACATATTGTAttaaaaaggattaaaaaaagagttttgtaGCTTTTTAAGTGTTTATCAACGCTATGGTCAACTTTATATGCTTGAATAGGTGTTTAGTGTCTTATGAATTGATGATGAAGCACTTTGAAACGTTTATGGTTTTAagtgtttttgattgtttatgtATTCAAGGCTGTTTTAAgattgtgaaaaaataaattaaatatcttctttgtgaAAAC
>TCONS_00026709
ACTCTACATGTCAGTGTACAGCTGCAGGTTCGGCGCATGCAGGTAGCTGCAGTGTCCAGGTGAATCATGGCTCTGACTGGGTTTTGTGGTTCCAGGCAACTGTTGGACCGCCATATGtgaaTGAATAAGAATTTTGTGCTTGAAGACTGAGGACAGACAAGTGCCACTGCGGACGTGGGCAAACTCCTGTGTTCTGAAGGAGCGCAGGGTGTTTGCTGAGGGAGAGGAGGTTGGTTCAGGACAGCACTACAAACCCGCACAGGAGAGTAGATGGGTACAAAGACTTCCCATTTCTGCAGAGGATGGGATCATAATGGACTACGCTCCGCAGGGTGAACCAACATCTTCAGATGTCTATGAAGAGGAAGCCTTGCTGAAGTACCTGAACAGGTTGCCTGGTCCACTCAGTTTTCAAGAGCTGATGCCTGGACTTTTGCGCAGAGaggtggaagtagccatcagtaaACTCGGCCTTCTTTTTGATAAAACCTACGCATGGGACATCTTTTCAGACATGATGAGAAGCCAGCTACTATGTACTCTCCCAAACGCTGACCTGCCTAAGCCTTTCACTGACACCACAAGAGCCATTTTGGTGGACTGGCTCATTCAAGTCCATGAAGTGTTTCAGTTCTCAGAGGAAACGCTTTATCTGACAGTGCACTTGTTGAATCGAGCACTCCGGCTCATCAAGGTGTCCATCTCCGGCCTGCAGTTGTTGGGTGTGGTTTGCCTCTTTCTGGCTGCTAAAAGAGAGGAATGTCTTTTACCAGAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000055250

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00026708 False 1736 mRNA 0.48 9 40698550 40708537
TCONS_00026709 True 775 processed_transcript 0.50 6 40702788 40708524

Neighbor

gene id symbol gene type direction distance location
XLOC_013576 si:ch211-132b12.7 coding downstream 13758 40668615 ~ 40684792 (-)
XLOC_013575 NA coding downstream 176026 40521492 ~ 40522524 (-)
XLOC_013574 NA coding downstream 183471 40513030 ~ 40515079 (-)
XLOC_013573 chrna5 coding downstream 189544 40486457 ~ 40509006 (-)
XLOC_013572 zgc:101040 coding downstream 217522 40479684 ~ 40481028 (-)
XLOC_013578 akt2 coding upstream 2651 40711188 ~ 40753583 (-)
XLOC_013579 vaspb coding upstream 53376 40761913 ~ 40856354 (-)
XLOC_013580 snrpd2 coding upstream 167336 40875873 ~ 40884087 (-)
XLOC_013581 foxg1c coding upstream 192031 40900568 ~ 40901707 (-)
XLOC_013582 pglyrp5 coding upstream 194099 40902636 ~ 40905901 (-)
XLOC_013384 BX323829.1 misc downstream 21156319 19542102 ~ 19542231 (-)
XLOC_013571 NA non-coding downstream 246260 40364311 ~ 40452290 (-)
XLOC_013570 NA non-coding downstream 839442 39854487 ~ 39859108 (-)
XLOC_013569 NA non-coding downstream 901715 39791715 ~ 39796835 (-)
XLOC_013588 NA non-coding upstream 523777 41232314 ~ 41232928 (-)
XLOC_013589 NA non-coding upstream 635269 41343806 ~ 41344821 (-)
XLOC_013590 NA non-coding upstream 642452 41350989 ~ 41351483 (-)
XLOC_013592 NA non-coding upstream 834005 41542542 ~ 41544182 (-)
XLOC_013598 NA non-coding upstream 1752351 42460888 ~ 42606669 (-)

Expression


Co-expression Network