CI01000340_10731548_10747121 (MST1RA)


Basic Information

Item Value
gene id CI01000340_10731548_10747121
gene name MST1RA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 10730673 ~ 10747648 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_10731548_10747121.mRNA
CTATATAGACAACTCCGTGACTAAAATCGAAAATCAAAGCTGGTTACGCTCTGACATGTTTATTTATCGACTGTTTAAAACTGCGCGTAAAAAGTTGCATATGAATTATTTTTAGTCAGTAGGAAATTAGTTTACAGGGTGTTATGCACGTTCCAATAGCCTACATTACAGAGAAAATCATTCACTTAAAGCTATATATTGCGTAATTATTCAGCCATTTTCCGTCTAATTCATAAGCTCGCTTGCAAAATTCTACTATGGTAACCATAGTTTCCGCCAAAATAGTTAAGTAATACCAAATATGGAAACGCCTTCAAGCTGTATTATTTATTGATTGATAACAGTGGTTTCTAATACCAAATTACCACAATTTAACTATGGTAGACTATATGGTGAAAACTGTGGTGTACATATTTGTATGTTTTTTTTTTCTTCTTCTCTTTTTTACACTATACACATCCTACAACATTTAGCCAAAAAAATGTGAAGCAAAACCTTGAAGCATCAATACATTTTAAAAGTAAAGTATGTCAAAAATGATTTGTGTAATGAGCAATAATGCATGCATAATAGAGTAAGGGAGTATTTTGCAATATAATATAAATATAATCAAAATGCTAAGTAACAGTCTATGAATATGTTGATCAGTTTAGTGAGAGCTGCATTTAGCAGTCTTATTGCCAAGTTAATGACAGGATGTAAATTGATGGAATGAATGTTGTTCTGACATAATGAAGAAAGCCTTTTACAGTGTCTGTTAATCTCATTTTCATTTATTTTTGTCATTTTTCCATTCAGAGGTCCTGGTTATCTTCATCATGTGTTAGTAACAGCAGTGACATCCCTTTTGCCTCAGGCTACATAGGACTGTGGAAATGTTCATCAGCCCCAGGACCTTGTTAAAGTGTGTCTGGTTGCAGATACATTTGACCTGTGCCCTAAAAACATGTCCTGCGATCCCACAAATGAACATAAACTTTTCTGTTGCCTACTCTGTATCTTTTTTTCAAACTACAAAAGCCATACAGAACATAGTTGTTAAAGAAAATTTTGCTGAAGTTTATGTAGCCTCTCAAAATGTTGTTGAAGCCTTGGACAGAAATCTCACTAAACTATGGGAATTAAGAACTGGCCCAGTTGGCAGTCCGGACTGTCAGACCTGTCACTGTAAAATTGAGAGTGAACCAGGAACTTCACTGGACACAGATAACCAAGTTCTTGATTTAGAGCCTCAGGGCGATCTTGACGTCCTGTATATCTGTGGGAGCACCCAGTATGGAGTCTGTAACATGCTTGAACTTAATGAAGGCCAAAAACCACTTGACCTTAAATGTTTATTCAATGAAAAAGCCAACTCGCCCTCGGATTGTCCTGACTGTGTTGCTAGTCCTCTGGGAACAAAGGTCAGTGTGGTCCAAGAAAGTTTTTCAAGTTACTTCTTTACAGCAGCTACCATCAATACCACCATTGCTGGGACTTTCGGAAAGCACTCTCTTTCCATTCGCCGCGTACTTTCCTCAGAAGATGGGTTTGACAGCCAAGTGAAGAGTCTGACGGTTCTCCCCAAATTCCAGGATACATTTACCATTGACTACATCTATACGTTCTCCACTGTAGAATATGTGTATTTCTTATCTGTACAGTGGGAGAGCCCAAAGAAACCAAACGCCAAGTTGCAGACCCATCTTGGGCGGCTGCCGATCAAGGACAACGAGATTTGGATGTACAGGGAAATCGTTCTGGAATGCCGCTTTGAGCCCAAACGCAGGAGAAGGAGCTTTAGGGATGTTGTGTACAACTCGGTTCAAGCTGCTCACTTCAGTACAGCAGGCAAGGAGCTGGCTGATGAGCTAGGGATGAAGATGGAAATCCCAGTTCTGTTTGGGGTGTTTGCTGTAACAGATAAAAAGGGGAATCCTATCAGCCAGTCTGCCTTGTGTGCATTTCCAATCGACTACGTGAACAGTGCCATAGATGAGGGGGTAGAGTCCTGCTGTTCAAATGGGATGGAGCAACTCTCACGGGGTTTGTGCCATTTCCAGTCCTGTGAAATGTGCCCACATGAGAATCCAGATGGTTTGGTTTGCAAAACTATCCCCACCATGGTGGCAAAGCCTTGCTCCAGAGTGGACTTCTTCAATGGACATATGAACGATGTGCTTTTCACTTCTATTCTGGTCACCACCATTGAGACCAAGACTGTGGCACACATCGGCACGGATCACGGAAGGCTCTTGCAGGTCATTCTGAGCAAATCAATGCCTGTAGTGTTTGCCAACTACTCTCTTGTGGAAGACATGGAGAGAGTGTCACGAATAGCTGCCATTCATTCTTCTGAGTCTCTGCTCTTTGTTGTTGGAAACAAGCTGATAAATGTGTCTCCCAGAGGTCCAGGCTGTTCCCATTTCATCAACTGTTCAGTCTGTTTAGCAGCGCCCAAGTTTATGGGATGTAGCTGGTGTGGTGGAGTCTGTTCCCAAAAGTGTGAAGATCAGTGGAGTAGCAACTCTTGCCCTCCTGTTATCACCCAGTTTTTTCCCAGCACAGTGCCCTCAAATGGTAAGAGTGAACTCACTCTCTGCGGCTGGAACTTCCGATCAGCTTCCCGACCTGCTATCAGTCAAACCTCTCACCAGGTTAAAGTGGGAAACAACAGCTGCACTATTATACCAAAGAAAAGCAGTAGCTCCCAGCTGGTTTGTAGGGTTGATGGTGAAGTGTCAGGTCTGGAGCAAAGTGTTGATATAACAATGGAAGTGAATGAAAAAAGAGTGGAAAGTGGATATTTCATCTCTGGGAAGGCTAGCATACAAGGCTTCAGTTTTGTGACCCCAGAAATCACAGATATCAATCCAAGCTTTGGACCTAAGTTTGGGGGAATCCGGGTCACCCTGTCAGGAAAACATCTGGATGCTGGTGGAAGCAGAACGGTCAGCCTTGGAGACAGAATTTGCCCTGTTAAAAGCATCTCCAGCAATGGAACTTCTATCATTTGCATGTCTGAAGGTGTTGAGGAAACTTCAGAAGTAGATGTGAAGGTTGTAATTGATGAATCAACTATTTCAGCAACAAAAACATTTAGCTACATGGTGAATCCTGAGGTGTTCAGTGTGAAGCCCAACTGTGGCTTTAGAAGGAATCCCACCCAGATGGAGTGTACAATCCCAGAATGTGAGGAGTCAACAGGAATCCTCTCTGTGGATTTAGATGGAGCCAAGGAACTCCTGTCTCAGACTTTTACCTGCCATGCTAACGGGGAACCCATCCCATTTGAAACAGAGGGCCATGTGCTTGAGCTTAGCCCAATGCAGGACAAAGTCTCATTACATCACAAAAAACTGACCCTGGTGTCCAGTTGCATGGAAATCATCATGACAATTAATGGAGTGGATTGCAAGGCTACAGTTTTGGACAATGAGATCACCTGCCGGATCCCCAAAAATCTCACAATCCCTAGACAGGGCGCACCAGTCAAGGTGTTTGTGAATGGAGAAGAATATGACATTGGTGTGGTAGTTACTGCAAAGAACAATTTTATTTTGGCCATGGTGCTGGGCATCATAGCTGCAGTTGGCTTGGGGGCAGCTCTGGCCTACTTTGCCATGGCACATGAGCGCAAGAAAAAAAAAACTGCACTTGCTCAGGTTCGACTATCCATGCGTTCATCTCACTTGGCGGTGGAGAATTATGACAGATCACCTGATGGTGACTACAGAAGAGGTCTAACAGCTCCTCCATTCCAAGGCTCGAGCTCAACGTTCACCAGTCTTCCGTATGCTGGCTCGATGGACTCTGCAGCAGCTCCTTTGATACCAACTCCGACAATCTCTATGTCTGCTCTCCGACCAGATCTGCTGGAAGAGGTGAAGAATGTTTTGATCTCACCCAAGAAGGTCAAAATCCAGCATGACCAAATCATTGGCAAAGGTCATTTTGGAACGGTGTATCATGGATATCTTATTGATAGTGATGAAAAAGAGACTCACTGTGCTGTCAAGTCACTCAATAGGATCACTGATCTGGAGGAGGTGGAGCAGTTTTTAAGAGAAGGAATCTTTATGAAGGCCTTCCACCATCCTCATGTCCTATCTCTTCTGGGCATTGTGCTTCCCAGTGATGGACTTCCCCTGGTGATCCTGCCATACATGAAACATGGAGACCTCCGACATTTCATCCGCTCTGCACAGAGGAGTCCTACAGTGAAGGACCTAATTGGCTTTGGGCTTCAAGTTGCCAAAGGAATGGAATATCTTGCAAACAAGAAATTTGTGCACAGAGACCTTGCTGCACGCAACTGCATGCTGGATGAGTCATTTACAGTGAAGGTGGCTGACTTTGGCATGGCACGTGATGTCTATGATAAGGAATACTACAGCATCCAGGACAGCAAGAAAGCAAAGCTGCCAGTCAAATGGATGGCTTTAGAAAGTCTACAGACACAGAAATTCACCACTAAATCAGATGTGTGGTCTTTTGGAGTGTTGATGTGGGAGATGATGACAAGAGGGGCCAGTCCGTATCCTGATGTGGACCCTTATGACATTACAGCATATCTGATGCAAGGCCGTCGACTGCCACAGCCACAATACTGCTTTGATTCCCTGTGGTCCATCCTAATACAGTGCTGGCATCCTGAGCCTGAGAAGAGACCAGGTTTCCCTACGCTCGTGCAAGCTATTCAAGAGATCCACTCCAACCTAGAGGGGGAGCATTACATCAACCTCCAGATCACCTATGTGAATCTAGACCAGCCCCGGCCATACTCCTCACTCTCCCCGGCCCCACCCGCACACTCAGACCACTCTTCCACCTGACCCTGGTCCCAAATGAAGTCTGAGCTGCCTTCATCCTGTGGATTCAAAGGCTCATATAGTCCTGTGAAGTTTCAGAACCAAAGAGCATGCACTGAAGATGATCTGCTGTATTTGGAGAATCCTAATGTGTGTCCAGCCGAAGACAATGCACATTCTATGTGTGCCTCTATAATAGTCATGCTTTTATGAACTAGTTGCACAGCAGAATTGGTGTCTTGTCTTTGGGATTTTAGCAATTTCTGGGCAAGTGCACTTTTTAAATGAATGCAAGTCTTTTGCCGTGTTATGTTGATTGTCAGGTTTTTTATACTTTTTTTAAAGCACATGGAATTGTTTAACAACTGAATCATCTGCTATTCATATAGTGCAACACTGTTCTATCCATACAAAATGCGATAAGATTCCAGCAACAAGCCATTTTTATGTCCACACTGCCAGTAAAAATTATAAGAGCTATATGATTACTTGAAATACGGTTCCATCAGTTTCATTCTACTACTTTTTTTGTGATAATTTGTTAATTGTAA

Function

symbol description
mst1ra Predicted to enable transmembrane receptor protein tyrosine kinase activity. Predicted to be involved in several processes, including phagocytosis; positive regulation of kinase activity; and positive regulation of protein kinase B signaling. Predicted to act upstream of or within protein phosphorylation. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be part of receptor complex. Predicted to be active in basal plasma membrane. Predicted to be integral component of plasma membrane. Is expressed in gill and intestine. Human ortholog(s) of this gene implicated in nasopharynx carcinoma. Orthologous to human MST1R (macrophage stimulating 1 receptor).

NR:

description
plasminogen related growth factor receptor 3

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_10731548_10747121.mRNA True 5341 mRNA 0.43 19 10730673 10747648

Neighbor

gene id symbol gene type direction distance location
CI01000340_10644426_10645811 GPX1, GPX1B coding upstream 84823 10644426 ~ 10645850 (+)
CI01000340_10455853_10465771 OXTRL, OXTR coding upstream 264150 10455299 ~ 10466523 (+)
CI01000340_10388851_10395247 NA coding upstream 335406 10388629 ~ 10395267 (+)
CI01000340_10296583_10355505 SRGAP3 coding upstream 374573 10296583 ~ 10356100 (+)
CI01000340_10252718_10253859 NA coding upstream 476220 10252718 ~ 10254453 (+)
CI01000340_10781781_10785861 CAMKVA, CAMKVB, CAMKV coding downstream 33820 10781468 ~ 10787792 (+)
CI01000340_10790372_10803993 NA coding downstream 42724 10790372 ~ 10804399 (+)
CI01000340_10869243_10869956 NA coding downstream 120589 10868237 ~ 10870398 (+)
CI01000340_10882106_10884072 NA coding downstream 133323 10880971 ~ 10884198 (+)
CI01000340_10896398_10912573 SEMA3FA, SEMA3F coding downstream 148586 10896234 ~ 10912704 (+)
G492190 NA non-coding upstream 37730 10689846 ~ 10692943 (+)
G492230 NA non-coding upstream 41811 10688584 ~ 10688862 (+)
G492227 NA non-coding upstream 50238 10680087 ~ 10680435 (+)
G492226 NA non-coding upstream 51077 10679350 ~ 10679596 (+)
G492223 NA non-coding upstream 87164 10642832 ~ 10643509 (+)
G492249 NA non-coding downstream 2999 10750647 ~ 10750873 (+)
G492399 NA non-coding downstream 112791 10860439 ~ 10860702 (+)
G492402 NA non-coding downstream 116172 10863820 ~ 10864055 (+)
CI01000340_10915894_10921086 GNAT1, GNAT, GNAT1.S non-coding downstream 168116 10915764 ~ 10921200 (+)
G492416 NA non-coding downstream 179461 10927109 ~ 10927501 (+)
G492194 NA other upstream 77979 10651683 ~ 10652694 (+)
G490896 NA other upstream 885621 9831473 ~ 9845052 (+)
G490839 NA other upstream 1493114 9234973 ~ 9237559 (+)
G490826 NA other upstream 1599276 9125184 ~ 9131397 (+)
G490645 NA other upstream 1687572 9038812 ~ 9043101 (+)
G492847 NA other downstream 861458 11609106 ~ 11696961 (+)
G493617 NA other downstream 2307744 13055392 ~ 13069652 (+)
G493740 NA other downstream 2767579 13515227 ~ 13517111 (+)
G493782 NA other downstream 3074546 13822194 ~ 13923213 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_032269 mst1ra coding NC_007117.7 CM002890.2 42475730 ~ 42505007 (+)