CI01000340_10869243_10869956


Basic Information

Item Value
gene id CI01000340_10869243_10869956
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 10868237 ~ 10870398 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_10869243_10869956.mRNA
GTTTAAAAACTCGAGAGAGGGGATACGCGCACTTCATTTGAAATTTGAACTGACACGGAATCAGTCACATAAATTAGTTTAAAGGAGCAACTACTTTGTGGACACGTGTACGCGGTTACTTTTGACTGGACGAATTGTTTTTGTTTCTGTACGTTTTCTTTGCGCTGGATTGTAAATGATTTGTACAGTGGGACACGCAGGACCATTTGCGACGGACGTTTTGTAGGTGAGTTCTGTGTTCATTTCAGTTTATTTTACGATTTACATGTATTTTATGCTTTACGTCATCATAAATACTTGTTTGTACAGAAGATCAGCAGCACATTTATCCAAATGTTTTTATAGGCTACATTATTTGTAAGAGGATCAGTCCATTACATGCTACTGAAATCCGATGGAAAAATATTTTGAAAGATTTACTAAGATATGTTTTTGCTGAAAATGGAAATGACACTGCTATTGATAATTGAAGTTCATTTGCAAGTCACATGCTGATGGATTTAGGCTATTTGATTTGTTTGGAATGAGGGGGAAAATAGCATTAGTTGTGACAAAGATCAACCACTTTAGTTTTTAAGAACAATACTTCACTGATTATTTATTATTTTTATTATTCTTTTACTTCTGCTTTTTGATAGTTAATTAAAAGGCCATTGTACTACAACAATAAAAACCATAACGTGCATTATGAATCTTTTAGTAATTCAATTATTACAAAGTGAAAGGTTTCCATGAGGAATTTGGAACAATATCTTACCATTTATCAGTAGACTCAATATTAAGGAACCGATAACCAATTGAGTATAAACCTGTAAATATCCATTAAAAAAAAATCATTCAAACTTGCTTCCATTGAATAAGAAGATATGTGAAATTGAAATCATGAATATATGATGATCTCTTTCAGCTCATTTATATCTGTCTAATGTTGATCCTCACCCCCTTCCTCCCTCCCTTCTCATGCAGGACCGAATAAATCTCTTGTGGGTCTTTGGATAAAGTGATCATGCAGGGAGTCGGGACTTTGGTGCTGGGGACCCTTCTGGTCTCTGTGTTCTCAGCTGTCTCGGTCCACAGCAACCCTTTGTCTTCCCTGCCACCCGCCTCTGTTCCACGAGTCTTCCTGTCCTTCAAAGGGATTGAGCATGTCTACCAGAAAGGACCAGAATTCAGAATTTGCGCAACTGTGAGTTTAACCCTTGCTGGGGGAATTGGATTTAATGTTAGGTTTGTTGGGGTTAGTGCGCGGCTCTTGGTTGGCTAAGCAATGCAATTAGTTTTCAGTTCTGAAACAGTATTTCCCATGGGATTGTTTTTTTTCTGAATATCCATGTTCTTGGTAGCAGCCCATTTTCCAGGACTACGCATCCATGATTTCTTATAACAGTGTAATTTTATTCTCAGGAATCGCAATTGAAAAGTAATATTTGCTTTTAAGCTTAAACTATATGTTTACAGTCTTTCCTCCAAATTGGAATACTGATGCTGTATATGATATCGGTGTGGTTGGTTTCCCAGGACCTTTATGTCTAATCTTAGTGTACTTCTGTCAGTCAACGTTGACACTGACCACTTTTAACTGCCAAAAAATACACTGGAGATATGCATGCACAGGATAGGATATTCCAACTTACAAAATGAAAAAATATATGATCTATGAGTTTTCTGGAGATCATCAAAATACTGTAGTGCAACTAAAGATGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_10869243_10869956.mRNA True 1706 mRNA 0.36 2 10868237 10870398

Neighbor

gene id symbol gene type direction distance location
CI01000340_10790372_10803993 NA coding upstream 63838 10790372 ~ 10804399 (+)
CI01000340_10781781_10785861 CAMKVA, CAMKVB, CAMKV coding upstream 81886 10781468 ~ 10787792 (+)
CI01000340_10731548_10747121 MST1RA coding upstream 120589 10730673 ~ 10747648 (+)
CI01000340_10644426_10645811 GPX1, GPX1B coding upstream 222387 10644426 ~ 10645850 (+)
CI01000340_10455853_10465771 OXTRL, OXTR coding upstream 401714 10455299 ~ 10466523 (+)
CI01000340_10882106_10884072 NA coding downstream 10573 10880971 ~ 10884198 (+)
CI01000340_10896398_10912573 SEMA3FA, SEMA3F coding downstream 25836 10896234 ~ 10912704 (+)
CI01000340_10915894_10921086 GNAT1, GNAT, GNAT1.S coding downstream 45496 10915764 ~ 10921200 (+)
CI01000340_10975991_10979709 TCTA coding downstream 104913 10975311 ~ 10980045 (+)
CI01000340_11013452_11016952 NA coding downstream 142539 11012937 ~ 11017219 (+)
G492402 NA non-coding upstream 4182 10863820 ~ 10864055 (+)
G492399 NA non-coding upstream 7535 10860439 ~ 10860702 (+)
G492249 NA non-coding upstream 117364 10750647 ~ 10750873 (+)
G492190 NA non-coding upstream 175294 10689846 ~ 10692943 (+)
G492230 NA non-coding upstream 179375 10688584 ~ 10688862 (+)
G492416 NA non-coding downstream 56711 10927109 ~ 10927501 (+)
G492420 NA non-coding downstream 60168 10930566 ~ 10931507 (+)
G492405 NA non-coding downstream 64452 10934850 ~ 10936632 (+)
G492421 NA non-coding downstream 116992 10987390 ~ 10988734 (+)
G492194 NA other upstream 215543 10651683 ~ 10652694 (+)
G490896 NA other upstream 1023185 9831473 ~ 9845052 (+)
G490839 NA other upstream 1630678 9234973 ~ 9237559 (+)
G490826 NA other upstream 1736840 9125184 ~ 9131397 (+)
G492847 NA other downstream 738708 11609106 ~ 11696961 (+)
G493617 NA other downstream 2184994 13055392 ~ 13069652 (+)
G493740 NA other downstream 2644829 13515227 ~ 13517111 (+)
G493782 NA other downstream 2951796 13822194 ~ 13923213 (+)
CI01000340_14100335_14108817 SLC16A1A other downstream 3227233 14099138 ~ 14108941 (+)

Expression


Co-expression Network