CI01000340_12562841_12563343


Basic Information

Item Value
gene id CI01000340_12562841_12563343
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 12562593 ~ 12563343 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_12562841_12563343.mRNA
GTTTGGCTGTAGCGCTTACACTCACAGACCCAGTTCCCAAGAGCATCAGGGTAGCGTTTCACTCATTTGGGCTGTTTGCGTTTATCCAGGGACTCTGTACAGTCATTCTTACCCTGACTGCACCTCAATGTAGGAAGTCTTTGCCTGATCCACAAACTGTTTCCGCATTGGTTAAGAGATACGTGCCTCTGGGGTTGAAAATGAGCCACTGCTGCTGTACAGCCTTTCACTGACACTCAATACAGGTGCATCTATTATTTACATGGTTTCAGTGGTTTTCAGACAGTTGTGAGGTTCTGGTTAAGATGTATTCTATTTAAGGACACACCTTTTCACTAATATTAGCATGCAGGGAAAATGCGTATATACAAATTGTTTTTTAATTTTTATAATAACTCAAACTGTTTACAGTCCTCGATTTTGGGTTGCATTTGAATCCAGACATGTTTGAAAGACATTTTAAAAGAGAAAACAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_12562841_12563343.mRNA True 481 mRNA 0.40 2 12562593 12563343

Neighbor

gene id symbol gene type direction distance location
CI01000340_12532321_12545278 EPHA2A coding downstream 17205 12532239 ~ 12545388 (-)
CI01000340_12515377_12519838 NA coding downstream 42613 12514746 ~ 12519980 (-)
CI01000340_11903883_11956886 CNTN3B coding downstream 605707 11903780 ~ 11956886 (-)
CI01000340_11779096_11787055 NA coding downstream 773834 11779091 ~ 11788759 (-)
CI01000340_11695434_11705476 PDZRN3B, PDZRN3 coding downstream 856795 11694675 ~ 11705798 (-)
CI01000340_12571142_12574655 TARDBPL, TARDBP coding upstream 7678 12571021 ~ 12574678 (-)
CI01000340_12577571_12625562 PTPRG, PTPRGA, CA16B coding upstream 14092 12577435 ~ 12625758 (-)
CI01000340_12771982_12782800 CAMK1A coding upstream 208230 12771573 ~ 12782800 (-)
CI01000340_12827332_12832015 RDH20 coding upstream 263939 12827282 ~ 12832626 (-)
CI01000340_12846755_12877559 KCNB1 coding upstream 282897 12846240 ~ 12878197 (-)
G493956 NA non-coding downstream 113571 12448791 ~ 12449022 (-)
G493955 NA non-coding downstream 116151 12446243 ~ 12446442 (-)
G493920 NA non-coding downstream 117876 12444516 ~ 12444717 (-)
G493919 NA non-coding downstream 118858 12443483 ~ 12443735 (-)
G493918 NA non-coding downstream 124606 12437758 ~ 12437987 (-)
G493987 NA non-coding upstream 150284 12713627 ~ 12713979 (-)
G493942 NA non-coding upstream 196884 12760227 ~ 12760573 (-)
G493939 NA non-coding upstream 197448 12760791 ~ 12812189 (-)
G494005 NA non-coding upstream 262323 12825666 ~ 12826157 (-)
G494014 NA non-coding upstream 338804 12902147 ~ 12902353 (-)
G493266 NA other downstream 445693 12067177 ~ 12116900 (-)
G493109 NA other downstream 884599 11673746 ~ 11677994 (-)
CI01000340_10357202_10357606 NA other downstream 2200189 10356758 ~ 10359856 (-)
CI01000340_10025958_10028902 SRSF3 other downstream 2534610 10025656 ~ 10029589 (-)
G491712 NA other downstream 3763016 8799201 ~ 8799577 (-)
CI01000340_14318434_14336130 NA other upstream 1650005 14318365 ~ 14336258 (-)
CI01000340_14547725_14551493 NA other upstream 1983656 14546999 ~ 14552983 (-)
G494872 NA other upstream 1994280 14557623 ~ 14559023 (-)
G495475 NA other upstream 3043398 15606741 ~ 15612563 (-)

Expression


Co-expression Network