CI01000340_14152734_14153363


Basic Information

Item Value
gene id CI01000340_14152734_14153363
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 14152175 ~ 14153363 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_14152734_14153363.mRNA
AAGTGTGACACAGCTATAGAAGAGTTCTTCAATGAAAAACTCTTCATAATTGGATACGTTGGGATTGGCATTGCTGGAATTATGATAATTGGCATGATCTTCAGCATGGTTCTTTGCTGTGCTATTCGAAACAGCAGAGAAGTTATTTAGGCACCTCACAGTTCCCCTCTCGCCCAATTGGACTGTTTCAAAGCCCACCTTCTTTGACCTCATCAGACCATCACATTCAGGCTTGGGAGCAGGGTGGAGGAACTCCCATGAGGCAGTGTGGGTCTTGTGGTACTGTTTTGTGAAAAGCATTATGTCTCTTTTCTGTTCTTTGCATTGTTTGAAGATGACCTCCACTGCATGGACTGCTACTGTAACACCATTAACCTTTATATTTATTTATTACTGAATCATCACAAGGGGTACGTAGTGTACATCTCTTGAACTTGATCTCCTGTAATAGAGTTCTCACATCTTGAGTCCTTCTTTGGTCCAGACTTTCACAGTGAATTGGGCATTTACTTACTGATGTAAATAAGCTCTCTGATGCCTCTTACTGATCAACTTATTTTCATGTTATTTTTAATGTTATTTATTGTGTGAACTAGACCAGTGCTGATAGATAATGGGTCATATGCTTATTGTGTTTTGCTGGTTATTGTAATTTTGCCACATCATATAGATACTGAATGAAGCCAAGGAGTGGATGTGTATGATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_14152734_14153363.mRNA True 709 mRNA 0.39 2 14152175 14153363

Neighbor

gene id symbol gene type direction distance location
CI01000340_14124155_14131724 SLC5A8L coding downstream 20439 14123873 ~ 14131736 (-)
CI01000340_14121598_14122814 NA coding downstream 29361 14121467 ~ 14122814 (-)
CI01000340_13774456_13796883 PPM1J, PPM1H coding downstream 355292 13774300 ~ 13796883 (-)
CI01000340_13748766_13759247 CAPZA1A coding downstream 392485 13748766 ~ 13759690 (-)
CI01000340_13737144_13746426 ST7L coding downstream 405749 13737144 ~ 13746426 (-)
CI01000340_14183801_14186441 NGF, NGFB coding upstream 30131 14183494 ~ 14186441 (-)
CI01000340_14255925_14261708 NA coding upstream 102394 14255757 ~ 14261753 (-)
CI01000340_14309675_14311339 RPLP2 coding upstream 156280 14309643 ~ 14311436 (-)
CI01000340_14318434_14336130 NA coding upstream 165024 14318365 ~ 14336258 (-)
CI01000340_14384828_14388836 APCDD1L coding upstream 230729 14384092 ~ 14389433 (-)
G494727 NA non-coding downstream 9987 14134758 ~ 14142188 (-)
G494702 NA non-coding downstream 50862 14101000 ~ 14101313 (-)
G494696 NA non-coding downstream 60954 14090978 ~ 14091221 (-)
G494688 NA non-coding downstream 81556 14070320 ~ 14070619 (-)
G494334 NA non-coding downstream 101452 14050490 ~ 14050723 (-)
G494779 NA non-coding upstream 28103 14181466 ~ 14181972 (-)
G494812 NA non-coding upstream 129349 14282712 ~ 14284064 (-)
G494767 NA non-coding upstream 198645 14352008 ~ 14352223 (-)
G494762 NA non-coding upstream 226007 14379370 ~ 14382292 (-)
G494740 NA non-coding upstream 277530 14430893 ~ 14432098 (-)
CI01000340_12577571_12625562 PTPRG, PTPRGA, CA16B other downstream 1478650 12577435 ~ 12625758 (-)
G493266 NA other downstream 2035275 12067177 ~ 12116900 (-)
G493109 NA other downstream 2474181 11673746 ~ 11677994 (-)
CI01000340_10357202_10357606 NA other downstream 3789771 10356758 ~ 10359856 (-)
CI01000340_10025958_10028902 SRSF3 other downstream 4124192 10025656 ~ 10029589 (-)
CI01000340_14547725_14551493 NA other upstream 393636 14546999 ~ 14552983 (-)
G494872 NA other upstream 404260 14557623 ~ 14559023 (-)
G495475 NA other upstream 1453378 15606741 ~ 15612563 (-)
CI01000340_16175837_16177624 NA other upstream 2018314 16171677 ~ 16178314 (-)

Expression


Co-expression Network