XLOC_013588


Basic Information

Item Value
gene id XLOC_013588
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 41232314 ~ 41232928 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00026989
GCTTTTCTCACTCATATTACACGGCTGCTGATTCACACGAAGGGCTCCGATGCGCATATGATTGTTGTAGTTGCTGTTAGACACAGTGCAGCAGTAGCAGCTTTACCTTCATCAGCTGAGCGACCTGCGAACTGCCGCATCACCTCCGCTCCCACAGCGCTCCCCGCTTCCGCTACGCACTACTTCTCACACCAAAAAAACAACGATTACTACATCAAACGGTTCTCTGAAGCCTTATCATCCTCCGTGACGATAAGAATAATGTATGTTGGAGCTGTTCCGCACGGGTTGTGTCACCCATAACCACGCGGTTCACCAATGTATCACTGGCGCATCAGTAACGCACGTCAGGATTTCATCATATCCCTCCGCCAGGTCGTgacccccccaccaccaccatcTTAAAAACGTTCACCATTACACAATTTTATGTATATAATActtttatattttgattatacACTACATAATGTGTTCTGCCGTCGAAACAAAGGTGAATACATGCCCATAAAATGGATTTATGAGGAAAAGTGGT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00026989 True 535 lncRNA 0.46 2 41232314 41232928

Neighbor

gene id symbol gene type direction distance location
XLOC_013587 fbxo36a coding downstream 17 41226444 ~ 41232297 (-)
XLOC_013586 zbtb38 coding downstream 12524 41198559 ~ 41219790 (-)
XLOC_013585 RASA2 coding downstream 67956 41097406 ~ 41164358 (-)
XLOC_013584 si:ch211-202c21.7 coding downstream 262733 40944144 ~ 40969581 (-)
XLOC_013583 polr2i coding downstream 319013 40909821 ~ 40913301 (-)
XLOC_013589 NA coding upstream 110878 41343806 ~ 41344821 (-)
XLOC_013590 NA coding upstream 118061 41350989 ~ 41351483 (-)
XLOC_013591 ptx3a coding upstream 131509 41364437 ~ 41375120 (-)
XLOC_013592 NA coding upstream 309614 41542542 ~ 41544182 (-)
XLOC_013593 fzd9b coding upstream 415884 41648812 ~ 41650648 (-)
XLOC_013384 BX323829.1 misc downstream 21690083 19542102 ~ 19542231 (-)
XLOC_013575 NA non-coding downstream 709790 40521492 ~ 40522524 (-)
XLOC_013574 NA non-coding downstream 717235 40513030 ~ 40515079 (-)
XLOC_013571 NA non-coding downstream 780024 40364311 ~ 40452290 (-)
XLOC_013570 NA non-coding downstream 1373206 39854487 ~ 39859108 (-)
XLOC_013569 NA non-coding downstream 1435479 39791715 ~ 39796835 (-)
XLOC_013598 NA non-coding upstream 1227960 42460888 ~ 42606669 (-)
XLOC_013600 NA non-coding upstream 1625075 42858003 ~ 42859256 (-)

Expression


Co-expression Network