CI01000340_14547725_14551493


Basic Information

Item Value
gene id CI01000340_14547725_14551493
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 14546999 ~ 14552983 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_14547725_14551493.mRNA
AGAGATCACCATGTATTTTTATTGTATGGAAAAGAGTAGGTTTAACATTTTCATAATAAAATAATGTTCTATAACGACAAAAATGTGCTTGAGAGGCAAGACTGCATAGGATATTAAGATTTTGAATTTTTCTTTTTCCATAAACCATTAGGAAATAGGGTCTTGTTTCTTTAAGCATTATCTTACTATTGACAAATGCCAATGAGGTAAGAAAAATAAACTGAATTCAAAATATTCTCTTAACCAAATCTTAAAAGACTAAAATAGGCCACTGAATAAGAAAATGTATATATATATATATATATATATATATATATATATATAAAATATTTTGCAGTAAATGTAATTATCAAATCCAAAATCTCACAATTTAGGGGAGCCAAAACATGATCCTGGTAATTCATAGTATTTGTACGAGATGGTGAAAACATACTACTTTACATATTTTGCTATTACAATCATTGGCCTTGATGGTTATGTTTTGGTTCGGGTTGTATGCTTTTGCACAACCCAACTGGCACAATTTTCAGTTTCATACAAATAATGAGGGATGGAGGAGCATTAGAGGTAAATCAGAGCTTGTCCAGACCCTGTCGAACCCACATTTACAGCATCTCTTCATTTCAGATGATTCAAAGGTTTCCCAAATCCCCTGACAGCAATGTTCGGCACTCACTCAGTTGACTTTCCCTCTTGCAGCTCCATGGCTTTGATTTTACAAAAGTTTTTCCAAGTCTCTGTCAGCGTCCAGATGAGCAAATGATAGATCTAATTACCTAATGTACTTCCATACTTTGGCATTGAATATGTGAATGTAATGTCACCACCACTGAGCCAGCTAAAAAAACAATAAAAAAAATCAAGACTGACGTGATTGTTTCCTTTTATACATTCGTTTTAAACATATAACAGCATCCACAACTCATTTTAATTCTGTAATGTGACATAATTCAGTATACAGCAATAAAATTCAGGGCTTTATAGAAAACCTTATAAATGTTTTACATTCATCCCAGCAAATATACTTACACGTAAAGCAGTATTGTATCTGTGGGTGGGCTCAGCTATCGCAGCCTAAAGCAGATGGAATCAGCTCATTTCCGTGTTTATCGCACACCATCAGTTCACATTGAATCTATTTGTAACATCTGGGCATTCTCTTTGGAACAATTTTTGGAGAACAATGTTTACCAATACATGATTTTGTTATGAACATTTGATTCAAAGGTCAGAAGGTGAGAGGTCTAAATCAGAAGTAAGAAGTTGCTTAAAACATAACTCTAAGAGAAAACAGGTTTCCAAACAGACAAATGTGATTTTGGGTTTAGTGGACTAACTCCAAACCTCTGAAAAGTAATTAGCGTCATCTGCTGGTCAAAATGTTCTTCCCACTGACTGTCTCACTTTTCAAATGGCCTCTTGATATTGTGCAGAAACTGTTGTTGAAAGTGTTGTGAAATGCATGAAGAGTGTCACTGTATTGAAAACGGATGACGGAGAAAACAAATCCTTTTAAAATGAACATCCAAATGCGTGTTCTTTTGGTAATTTGCTCAGATGATCTTGCAACAATCATACCTGCCCTGAGAGGAAAAACAAAAATCTCAGCAGGGGAGCGGGGAATATCTCAAGCCAGCCACAAAAAGGGAAAACAGGGGGCCTCATTACTCACCAGGACAGGTCAGTTTGTAAATTCCCAACACCGACTCCTGGAGATTACAGTGGGTAGTTTCGGTTTTGAATGCACTGTGAAAGAGGATATAAAGAAAACAGGAGATTGTCAGAAAAAGGAGGTTAAACATGCCTGCTGTGTCACGGTACACACACACATTATTATGGAGGAACAATACAGCTCCAACCAAACAACCATCAGCTTACAAGTCAAAAACCAAACAGATGAACCTCCTGTGCTCATAGTCGCTGCAAGACGCCGAACTCGGTGTGCTGCGATCAGTGCGCCTTCTGCCACTGCCGCCTGTTCAAGACCGTCTGCTACTGCCGCATGGGCTACCCGAAGTGCTGAACACTCTCTGACAGAAGCTATCATGATCAGGATGATCATGTGACTGTCCCTATCTTAAAGGCTTGTTTATAAAACCCTGTGGGATTAAGACAACTGATTATCCATGCACTCTATCATATAATCATGACCAAAATCCGAATTTTCGGAGATTTCCCGGCCTGATATAGCGACAGCTCGTCAGATGCGCCTGGGAATAAA

Function

NR:

description
agouti signaling protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_14547725_14551493.mRNA False 2221 mRNA 0.38 4 14547570 14552983

Neighbor

gene id symbol gene type direction distance location
CI01000340_14515689_14516087 ATP5E coding downstream 31044 14515341 ~ 14516739 (-)
CI01000340_14506530_14506877 NA coding downstream 40693 14506406 ~ 14506877 (-)
CI01000340_14467309_14496470 GNAS.L, MGC68706, GNAS coding downstream 51007 14466969 ~ 14496563 (-)
CI01000340_14455602_14462035 NELFD, NELFCD coding downstream 83763 14455602 ~ 14463807 (-)
CI01000340_14442412_14444888 NA coding downstream 102660 14441414 ~ 14444910 (-)
CI01000340_14576054_14589873 RALY coding upstream 22853 14575836 ~ 14590203 (-)
CI01000340_14823900_14824982 NA coding upstream 270788 14823771 ~ 14825387 (-)
CI01000340_14835497_14846831 MTSS1 coding upstream 282253 14835236 ~ 14846831 (-)
CI01000340_14872482_14891188 NA coding upstream 319097 14872080 ~ 14891618 (-)
CI01000340_14894726_14899916 OSGN1 coding upstream 340610 14893593 ~ 14899916 (-)
G494855 NA non-coding downstream 4051 14542418 ~ 14543519 (-)
G494719 NA non-coding downstream 81642 14464258 ~ 14465928 (-)
G494852 NA non-coding downstream 100053 14447184 ~ 14447517 (-)
G494851 NA non-coding downstream 100482 14446750 ~ 14447088 (-)
G494869 NA non-coding upstream 9114 14562097 ~ 14564627 (-)
G494902 NA non-coding upstream 163308 14716291 ~ 14716574 (-)
G494867 NA non-coding upstream 190734 14743717 ~ 14745057 (-)
G494861 NA non-coding upstream 194987 14747970 ~ 14749440 (-)
G494854 NA non-coding upstream 201900 14754883 ~ 14756719 (-)
CI01000340_14318434_14336130 NA other downstream 227293 14318365 ~ 14336258 (-)
CI01000340_12577571_12625562 PTPRG, PTPRGA, CA16B other downstream 1874045 12577435 ~ 12625758 (-)
G493266 NA other downstream 2430670 12067177 ~ 12116900 (-)
G493109 NA other downstream 2869576 11673746 ~ 11677994 (-)
CI01000340_10357202_10357606 NA other downstream 4185166 10356758 ~ 10359856 (-)
G494872 NA other upstream 4640 14557623 ~ 14559023 (-)
G495475 NA other upstream 1053758 15606741 ~ 15612563 (-)
CI01000340_16175837_16177624 NA other upstream 1618694 16171677 ~ 16178314 (-)
CI01000340_16515291_16518346 TUSC2A, TUSC2 other upstream 1961916 16514899 ~ 16518531 (-)
G496845 NA other upstream 2490740 17043723 ~ 17045688 (-)

Expression


Co-expression Network