CI01000340_14823900_14824982


Basic Information

Item Value
gene id CI01000340_14823900_14824982
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 14823771 ~ 14825387 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_14823900_14824982.mRNA
AGAAAACAGAATATTTCTTTACCGTTAATGCTATAAAGTTTTTTCAGATAACCTAAATATTGTGCTTTATGTCAGAACATCTAAATTAAGTCCAAAATTTAATTTAATGAACTATATCAGCCTAACAAATTACATTAATGGAAGTAATTTTTGTGGTTTAGATCAACTTTTTATGGTGCAGTAGTAGTAGCCTTTCACTTTCATTGTATGTAAAACAGAAGCTTGAGCATTCCTTTCCAATCTCCTTTTGTGTTCCACGCAAGATAGAAACTCATACGGGTTTGGACTGACATGAGGTTGAGTAAATGATGCCAGAAATTTCAATTTTGGCATAACTATCGCTTTTAATTGCGCCAGAGCTGAAGTACATGAAGTCACGTGAAACCCCGCGTATGTCCAAAGGTAATGGAAATGGAGAAGGCAAGTCTACCTCTTCAGGTGGGAGAGATAGGCATGCCTGTTTTTACTGCCTTGACCCAGATCACCTGCTTGCAGAGTGCTGGGCTTGGGAAAAGAAAAATGTTGATGATGATTAAGCCTGCAATTTGTGACGAAACTGATGTGAATATAAACCCACTCAAACTTTGCATTGGTAAAGCTCCTTTAAGTGGAGTGCAGAGAACAGACTCGTCCCATCCTCCATGTTCTGATGCGGTGGCAAGTTATGAGCAACTGCCTGATGGAGGAAATGCTTGCTTGAGTAATAACGGTGTGACAACAGAGAAATGTAAGCCCATTTGTGATTTGCCTTATTGTTGTGACATCCATCACATAGTCTTATGTGCACCATTTTCAAGTCCAGAAATGTGTACCTGCAAATGTACCTACTGGTCATTTACAAGTCAAGACACTTCAGCGTGTAATAAAATCCTTCTTTTGGCCAACCTGCAAATTCTTCTTGGCAGAATTTGTGAGAGATGTTCTTGTTCTTGTAGGCCTGCTGTGATATGTTATGGAGGTAGTGTGGTTCTACTTATGTTCACAAAGCCCCCTTAACGTCACTTGTCTGGCAATCTGAAAATGCCGTGGTCCATGTACTGTTAAGAAAATTGTGGTATGATGTGTTGTACATGTAGTGTGACTTTTGATTTTCTTTGTTGCATTTTGTGAAATGCAAAGAAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_14823900_14824982.mRNA True 1125 mRNA 0.39 2 14823771 14825387

Neighbor

gene id symbol gene type direction distance location
CI01000340_14576054_14589873 RALY coding downstream 233568 14575836 ~ 14590203 (-)
CI01000340_14547725_14551493 NA coding downstream 270788 14546999 ~ 14552983 (-)
CI01000340_14515689_14516087 ATP5E coding downstream 307245 14515341 ~ 14516739 (-)
CI01000340_14506530_14506877 NA coding downstream 316894 14506406 ~ 14506877 (-)
CI01000340_14467309_14496470 GNAS.L, MGC68706, GNAS coding downstream 327208 14466969 ~ 14496563 (-)
CI01000340_14835497_14846831 MTSS1 coding upstream 9849 14835236 ~ 14846831 (-)
CI01000340_14872482_14891188 NA coding upstream 46693 14872080 ~ 14891618 (-)
CI01000340_14894726_14899916 OSGN1 coding upstream 68206 14893593 ~ 14899916 (-)
CI01000340_14910995_14919035 PIGU coding upstream 85212 14910599 ~ 14919357 (-)
CI01000340_15035570_15229330 PTPRT coding upstream 210183 15035570 ~ 15229330 (-)
G494909 NA non-coding downstream 54557 14769004 ~ 14769214 (-)
G494854 NA non-coding downstream 67052 14754883 ~ 14756719 (-)
G494861 NA non-coding downstream 74331 14747970 ~ 14749440 (-)
G494867 NA non-coding downstream 78714 14743717 ~ 14745057 (-)
G494902 NA non-coding downstream 107197 14716291 ~ 14716574 (-)
G495450 NA non-coding upstream 468886 15294273 ~ 15295000 (-)
CI01000340_15418307_15418626 BLCAP.S, GM3852, BC10, BLCAP non-coding upstream 592385 15417772 ~ 15418667 (-)
G495459 NA non-coding upstream 600262 15425649 ~ 15430109 (-)
G495415 NA non-coding upstream 605829 15431216 ~ 15431529 (-)
G495502 NA non-coding upstream 641675 15467062 ~ 15467329 (-)
G494872 NA other downstream 264748 14557623 ~ 14559023 (-)
CI01000340_14318434_14336130 NA other downstream 503494 14318365 ~ 14336258 (-)
CI01000340_12577571_12625562 PTPRG, PTPRGA, CA16B other downstream 2150246 12577435 ~ 12625758 (-)
G493266 NA other downstream 2706871 12067177 ~ 12116900 (-)
G495475 NA other upstream 781354 15606741 ~ 15612563 (-)
CI01000340_16175837_16177624 NA other upstream 1346290 16171677 ~ 16178314 (-)
CI01000340_16515291_16518346 TUSC2A, TUSC2 other upstream 1689512 16514899 ~ 16518531 (-)
G496845 NA other upstream 2218336 17043723 ~ 17045688 (-)
G496853 NA other upstream 2352105 17177492 ~ 17242739 (-)

Expression


Co-expression Network