Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000340_14872482_14891188 |
| gene name | NA |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 14872080 ~ 14891618 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000340_14872482_14891188.mRNA | True | 1456 | mRNA | 0.43 | 6 | 14872080 | 14891618 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_14835497_14846831 | MTSS1 | coding | downstream | 25249 | 14835236 ~ 14846831 (-) |
| CI01000340_14823900_14824982 | NA | coding | downstream | 46693 | 14823771 ~ 14825387 (-) |
| CI01000340_14576054_14589873 | RALY | coding | downstream | 281877 | 14575836 ~ 14590203 (-) |
| CI01000340_14547725_14551493 | NA | coding | downstream | 319097 | 14546999 ~ 14552983 (-) |
| CI01000340_14515689_14516087 | ATP5E | coding | downstream | 355554 | 14515341 ~ 14516739 (-) |
| CI01000340_14894726_14899916 | OSGN1 | coding | upstream | 1975 | 14893593 ~ 14899916 (-) |
| CI01000340_14910995_14919035 | PIGU | coding | upstream | 18981 | 14910599 ~ 14919357 (-) |
| CI01000340_15035570_15229330 | PTPRT | coding | upstream | 143952 | 15035570 ~ 15229330 (-) |
| CI01000340_15312803_15315594 | NA | coding | upstream | 421123 | 15312741 ~ 15315594 (-) |
| CI01000340_15318569_15329407 | RBL1 | coding | upstream | 426914 | 15318532 ~ 15330503 (-) |
| G494909 | NA | non-coding | downstream | 102866 | 14769004 ~ 14769214 (-) |
| G494854 | NA | non-coding | downstream | 115361 | 14754883 ~ 14756719 (-) |
| G494861 | NA | non-coding | downstream | 122640 | 14747970 ~ 14749440 (-) |
| G494867 | NA | non-coding | downstream | 127023 | 14743717 ~ 14745057 (-) |
| G494902 | NA | non-coding | downstream | 155506 | 14716291 ~ 14716574 (-) |
| G495450 | NA | non-coding | upstream | 402655 | 15294273 ~ 15295000 (-) |
| CI01000340_15418307_15418626 | BLCAP.S, GM3852, BC10, BLCAP | non-coding | upstream | 526154 | 15417772 ~ 15418667 (-) |
| G495459 | NA | non-coding | upstream | 534031 | 15425649 ~ 15430109 (-) |
| G495415 | NA | non-coding | upstream | 539598 | 15431216 ~ 15431529 (-) |
| G495502 | NA | non-coding | upstream | 575444 | 15467062 ~ 15467329 (-) |
| G494872 | NA | other | downstream | 313057 | 14557623 ~ 14559023 (-) |
| CI01000340_14318434_14336130 | NA | other | downstream | 551803 | 14318365 ~ 14336258 (-) |
| CI01000340_12577571_12625562 | PTPRG, PTPRGA, CA16B | other | downstream | 2198555 | 12577435 ~ 12625758 (-) |
| G493266 | NA | other | downstream | 2755180 | 12067177 ~ 12116900 (-) |
| G495475 | NA | other | upstream | 715123 | 15606741 ~ 15612563 (-) |
| CI01000340_16175837_16177624 | NA | other | upstream | 1280059 | 16171677 ~ 16178314 (-) |
| CI01000340_16515291_16518346 | TUSC2A, TUSC2 | other | upstream | 1623281 | 16514899 ~ 16518531 (-) |
| G496845 | NA | other | upstream | 2152105 | 17043723 ~ 17045688 (-) |
| G496853 | NA | other | upstream | 2285874 | 17177492 ~ 17242739 (-) |
