CI01000340_15559928_15562340


Basic Information

Item Value
gene id CI01000340_15559928_15562340
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 15559602 ~ 15562340 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_15559928_15562340.mRNA
ACCCAGAGGGCCGCAGGTTAAAGAGCATTCAGAGGAGTACAGAGACAGGGCTGGCAGTAGAGATGCCCAGTCGTACGGTCCGACAGGCGAGCCACGAGTCCATCGAGGACAGCATGAACAGCTATGGCTCAGAGGGAAACTTCATCATGGGAGTAAAATCCAGCCCAATTCAGCTGGATTACTGCGCAGTTTATGGAGCATGGGGATTACAGTTTTGGCTGCCATCGCTGAGGATATTTTACCATATTACATTGCATCTTATGCATCTCATGAATACATAACGGAGTAAAACATATTTTACATAAACACTCGCTGTCGGTCTGAGCTCTGACAAACAACAGTGATGGAAAGTCATAGCGCAAGGTTGATTTGATGCAATGGTATTTTTGGATAAACTTCTGTGGAAGTTTCTCTAATATTTATTCAATATCTATTTTATGCGGTTTCCATTAGATATTATTTGTAACTTGCCTTTTAGGCTAGATAAAGTTGGGCTTTTTGCCATTAAACACTTTAAACGTTATATGAAAAGTAAGAAAACATTACGAAGAGTACATTTATAAAAACATTTTAAAAATGTAAAAGCATTACAAAAAGCATCAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_15559928_15562340.mRNA True 607 mRNA 0.39 2 15559602 15562340

Neighbor

gene id symbol gene type direction distance location
CI01000340_15549307_15555642 RIMS4 coding downstream 1823 15548475 ~ 15557779 (-)
CI01000340_15433393_15440042 PSMF1 coding downstream 119415 15433316 ~ 15440187 (-)
CI01000340_15418307_15418626 BLCAP.S, GM3852, BC10, BLCAP coding downstream 140976 15417772 ~ 15418667 (-)
CI01000340_15334006_15357378 CHD6 coding downstream 202224 15333088 ~ 15357378 (-)
CI01000340_15318569_15329407 RBL1 coding downstream 229099 15318532 ~ 15330503 (-)
CI01000340_15614801_15623230 TOMM34 coding upstream 52387 15614727 ~ 15623456 (-)
CI01000340_15666594_15673044 IF6, EIF6.S, EIF6 coding upstream 104120 15666460 ~ 15673044 (-)
CI01000340_15677629_15704765 MMP24 coding upstream 115250 15677590 ~ 15706680 (-)
CI01000340_15723386_15729584 FAM83C coding upstream 160770 15723110 ~ 15729978 (-)
CI01000340_15741859_15763888 NA coding upstream 179017 15741357 ~ 15763888 (-)
G495534 NA non-coding downstream 25645 15533729 ~ 15533957 (-)
G495530 NA non-coding downstream 32856 15526530 ~ 15526746 (-)
G495504 NA non-coding downstream 86769 15472524 ~ 15472833 (-)
G495502 NA non-coding downstream 92273 15467062 ~ 15467329 (-)
G495415 NA non-coding downstream 128073 15431216 ~ 15431529 (-)
G495538 NA non-coding upstream 23179 15585519 ~ 15585808 (-)
G495539 NA non-coding upstream 24813 15587153 ~ 15587443 (-)
G495475 NA non-coding upstream 44401 15606741 ~ 15612563 (-)
G495485 NA non-coding upstream 51159 15613499 ~ 15623995 (-)
G495545 NA non-coding upstream 72176 15634516 ~ 15634737 (-)
G494872 NA other downstream 1000579 14557623 ~ 14559023 (-)
CI01000340_14547725_14551493 NA other downstream 1004434 14546999 ~ 14552983 (-)
CI01000340_14318434_14336130 NA other downstream 1239325 14318365 ~ 14336258 (-)
CI01000340_12577571_12625562 PTPRG, PTPRGA, CA16B other downstream 2886077 12577435 ~ 12625758 (-)
G493266 NA other downstream 3442702 12067177 ~ 12116900 (-)
CI01000340_16175837_16177624 NA other upstream 609337 16171677 ~ 16178314 (-)
CI01000340_16515291_16518346 TUSC2A, TUSC2 other upstream 952559 16514899 ~ 16518531 (-)
G496845 NA other upstream 1481383 17043723 ~ 17045688 (-)
G496853 NA other upstream 1615152 17177492 ~ 17242739 (-)

Expression


Co-expression Network