CI01000340_16353966_16364847



Basic Information


Item Value
gene id CI01000340_16353966_16364847
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 16353816 ~ 16364896 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000340_16353966_16364847.mRNA
AGTCTTGAAATCTGTTTTATTTTAATGAATATAATGCATTAAAGTCAGCATGACGTCAACTAGGGCTGGTCGTTACTCTTTAGTAATTATAGGAGCTGCTGTTATAGAGAGAGTGATTGAGAGTCCGCCTTCATGGGCTGATAAGCGGAGCCGTTTTTCTCGCCGACGCGAGCCAGTCACTCGTCAGTCCATTCGATGGAAGCCGCCAATTCTGTCCCAATTCTCTCAAGTTGACGTAAAACAGTGCTTGTGGTTCAGCCATTATCTGGTAACAGGGGAACGTACAGCTTCAAACACAGTGTTAGAGGCCACAGCCCTTACTAAATGCTCTGCCAGCTGTATGAGAGCGTGTGTGTGTGAACGGACCCCTCTTTCTAGGGAGATTGCTATTGGCTTTTTGCCTAGTCCTCAGTTTGACATAGATGGATTTGTGGGTAATGGAGTCCCTGGGGTGGAGGGGATAAGTGGGCATCCCAGGGGGTCAGATTACCGTGGACGGCATGGCGGTGTGCTGAGTCAGGCTATTTATATCGACAAGAAAAGTCATTTTAATGTGGAGCGAAATACACCGAAACAGCTGGTGGAGAAGGTGGCAGAAGACATCGCCAATCTGCTGAAAAGGAAACGTAAAGCTCTGGAGGACATCGACACAGCCAAACATAAGACGCTCAAAGAGTTTGGGATGAATGGAACATCGCATTTACACATTCTCGACTATTATGATGAACTGGATCGTATTGACTGGACGTTGCGCAGATGCGCAGCATGTGACCGAGTGAATCAGGCTGTCTTACACCGTGAAATTCAGTATGACATTGTCGAAGCAGACACACAAAGGAAACAGAGTGGTTGTAGCGTGTCATAATGTACACACACACACACACTTCATCATATCGCAATTTGTTTTTTTGGTACCCTGGTTTACTCTCCTCTGCCCGCGTTTAATTGGCCGGGCCCCCAGATCTTCGTACGTGCTAAATTTAGTCCCGTGCTCTCTGCTGCCCCTAAAAATAAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000340_16353966_16364847.mRNA True 1015 mRNA 0.47 6 16353816 16364896
Loading

Neighbor


gene id symbol gene type direction distance location
CI01000340_16278246_16280290 NA coding downstream 72999 16278027 ~ 16280817 (-)
CI01000340_16206491_16266692 CACNA2D2, CACNA2D2A coding downstream 87124 16206252 ~ 16266692 (-)
CI01000340_16184729_16192901 MST1L, MST1 coding downstream 160915 16184043 ~ 16192901 (-)
CI01000340_16175837_16177624 NA coding downstream 175502 16171677 ~ 16178314 (-)
CI01000340_16139895_16145747 NA coding downstream 207605 16139895 ~ 16146211 (-)
CI01000340_16408042_16409453 NA coding upstream 43089 16407985 ~ 16412936 (-)
CI01000340_16492560_16496822 NA coding upstream 127245 16492141 ~ 16497962 (-)
CI01000340_16502291_16507977 HYAL2, HYAL2A coding upstream 137031 16501927 ~ 16509948 (-)
CI01000340_16515291_16518346 TUSC2A, TUSC2 coding upstream 150169 16514899 ~ 16518531 (-)
CI01000340_16540718_16544143 RPS10, RPS10-NUDT3, RPS10.L coding upstream 175822 16540718 ~ 16544143 (-)
G495682 NA non-coding downstream 38686 16311206 ~ 16315130 (-)
G495668 NA non-coding downstream 67482 16285926 ~ 16286334 (-)
G495642 NA non-coding downstream 256615 16096190 ~ 16097201 (-)
CI01000340_16006372_16024582 GNAI2 non-coding downstream 324835 16006340 ~ 16027056 (-)
G495630 NA non-coding downstream 337681 16014324 ~ 16016135 (-)
G496641 NA non-coding upstream 94745 16459641 ~ 16459909 (-)
G496651 NA non-coding upstream 160650 16525546 ~ 16527155 (-)
G496658 NA non-coding upstream 214046 16578942 ~ 16579856 (-)
G496659 NA non-coding upstream 215217 16580113 ~ 16580492 (-)
G496685 NA non-coding upstream 277728 16642624 ~ 16643141 (-)
G495475 NA other downstream 741253 15606741 ~ 15612563 (-)
G494872 NA other downstream 1794793 14557623 ~ 14559023 (-)
CI01000340_14547725_14551493 NA other downstream 1798648 14546999 ~ 14552983 (-)
CI01000340_14318434_14336130 NA other downstream 2033539 14318365 ~ 14336258 (-)
G496845 NA other upstream 678827 17043723 ~ 17045688 (-)
G496853 NA other upstream 812596 17177492 ~ 17242739 (-)
CI01000340_18419431_18419838 NA other upstream 2054422 18419058 ~ 18421201 (-)
G497442 NA other upstream 2793973 19158869 ~ 19166778 (-)

Expression


CI01000340_16353966_16364847 Expression in PRJCA010000

Bar chart with 27 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.4.
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CI01000340_16353966_16364847 Expression in each Bioproject

Bar chart with 15 bars.
CI01000340_16353966_16364847 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 30.
End of interactive chart.

Co-expression Network