CI01000340_18302048_18303998


Basic Information

Item Value
gene id CI01000340_18302048_18303998
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 18301388 ~ 18304048 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_18302048_18303998.mRNA
ATTCGAATTTACTGCCCATGTTAAAGAACACATTGTAATTTGACCTCAAAATGAACCGACGAAAAATAAGACCAAACTGGAAGACATTAATTCAAATCCCCCGCAGGGCTTCAGGGCACTTTGATCAGAACCTGTCAGTGCTTGATGTGGGGCATGTGTTTCCTACCCGTCAGCGCCTTACAGAAACGGCGGTACGCTGTGGCGCACGGGTCCACCCGCCACCCGAGACCCCCCTTCAGGATGTGGTGGGCTCGGCAGTAGCTGCACCCCCAAATGCACATGCATATACAGTTAATTTCCTGCATAAACCCCATCCGGATGTTTTTGACATCAGACGCCGGTTTGAGGCAGATCAGGCTGATTTTGTTTTCTTGTTTTATGTCAGCAAATGTGACCTTTATTCAAAGATTGTGTGCATGAACAAAGGGTTTCTAGTTAAGGACTTTAAAGCATCAGCGAGGGCCGAGGCAGAATGCGTGGGGGCAGGGCTGCAAAAACACATTTCGTGGAAGTTTTTTTATGAGCTGTAAATGCAGGAAACTTTGACAAGGCCTGGAAGTTGCTGATATTGTTTGGGCTGTGATTATGTGGCAGTTTGACAGGCCGACAGGCCCACCTGAGCGAGCTGAAGAGAAGCTAAAGCTAATCGCTAACGGAGAAAATACCACAGAACTTGCAAAATGAACTCAGCTGTGACCAACTACCTTTTCCCTGTGGGATTTGAGGCAGATCGTCGCACCGCTAGTGTTTTTAAATGTGTCTTCCCGTATTACATCCAGCCTCATGACTTGGTGAATCCCACCAATCACATGCCAAGGTCATACCCTACCAAAAAAAAAAAAAAAAGAAATAGTTTAGTAATGAAGCCATTCCATTGTAATACAAAAATGTATTTAATTTGTTTCCCTTTTGAGAATTTTTGTATTTTTCATTACTCTCGATGGAAATTCTGTAGATTTGCATTATTGTAGTAATATTTATGTTAGTTTTTAAATGTAATATTTATATAAATAATAATATATTTAAATTATTATAATAATTATATAATAATATTATATATATGATAATATAAATACATAATTATTTTTAAAATTTATATATATAAATAATATATTTTAATTAATATAATAATTGTAATATATATATATATATATATATATATATATATATATAATTTTAAATGTATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_18302048_18303998.mRNA True 1190 mRNA 0.37 3 18301388 18304048

Neighbor

gene id symbol gene type direction distance location
CI01000340_18228042_18229807 NA coding downstream 71581 18227175 ~ 18229807 (-)
CI01000340_18185156_18206837 NA coding downstream 94551 18184910 ~ 18206837 (-)
CI01000340_18091595_18104080 CBFA2T2 coding downstream 197308 18090808 ~ 18104080 (-)
CI01000340_18030360_18041157 ITCHB, ITCHA, ITCH coding downstream 260231 18030245 ~ 18041157 (-)
CI01000340_18013773_18027276 DDX27 coding downstream 274112 18013531 ~ 18027276 (-)
CI01000340_18408556_18408855 NA coding upstream 104474 18408522 ~ 18408855 (-)
CI01000340_18419431_18419838 NA coding upstream 115010 18419058 ~ 18421201 (-)
CI01000340_18482872_18484601 NA coding upstream 177301 18481349 ~ 18485055 (-)
CI01000340_18485385_18491222 NA coding upstream 180799 18484847 ~ 18491593 (-)
CI01000340_18540426_18543271 SLC32A1.S, SLC32A1, VIAAT coding upstream 236213 18540261 ~ 18544300 (-)
G497044 NA non-coding downstream 134450 18162350 ~ 18166938 (-)
G497105 NA non-coding downstream 236303 18064125 ~ 18065085 (-)
G497099 NA non-coding downstream 250202 18050328 ~ 18051186 (-)
G497094 NA non-coding downstream 256934 18044182 ~ 18044454 (-)
G497092 NA non-coding downstream 294373 18006655 ~ 18007015 (-)
G497171 NA non-coding upstream 107232 18411280 ~ 18411572 (-)
G497173 NA non-coding upstream 110425 18414473 ~ 18414707 (-)
G497177 NA non-coding upstream 114705 18418753 ~ 18419030 (-)
G497200 NA non-coding upstream 224279 18528327 ~ 18530628 (-)
G496853 NA other downstream 1058649 17177492 ~ 17242739 (-)
G496845 NA other downstream 1255700 17043723 ~ 17045688 (-)
CI01000340_16515291_16518346 TUSC2A, TUSC2 other downstream 1781414 16514899 ~ 16518531 (-)
CI01000340_16175837_16177624 NA other downstream 2121303 16171677 ~ 16178314 (-)
G495475 NA other downstream 2688825 15606741 ~ 15612563 (-)
G497442 NA other upstream 854821 19158869 ~ 19166778 (-)

Expression


Co-expression Network