CI01000340_19288790_19292748 (GPR180)


Basic Information

Item Value
gene id CI01000340_19288790_19292748
gene name GPR180
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 19288096 ~ 19293397 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_19288790_19292748.mRNA
ACTCACTGTATCGATCACTCACTCCACTGTTCTTCAAGAAATAATTACATGATTCTCGGAAGCTTCGTGAACACAGCGCTCACGACAGTTTGAGCAGCGGTTTGCGGCAGCGCTGACACGTATGAGCCGAGCTGCCAGCGACTCTGTCCCCGCCTCCGCTGCGCTCTCATTGGCTGCTTCACTGCGCTAGACTGAACATGCGTATTCCGATTGGCTGTAGCAGAAGTCAATCATCCGGTGGGCGGAAAAGGACAGAATTACCTCATTGATTGCAGTGAATGAAGAGAATAAGAGCTTCTGTTGAAATGAAATAATGTTTGTGTACTTTATCATTCTCATTGTTCTTTTGTTCAGTTCATGTCCTGCAGCGGGAAAAACCATTTCTGGGGTTTTCAGGAGCGACGCGGCGAGAGAAAATAATGGGCAATACATCACAAGATTTCTGTATCATGGTGGGTGTCTGATATTAATAAAACATATCATGCATTTGCATTTTTCCTCTATGTATTTGCATGCATGTTGTGTCCCGGCTTTCTCTTCACACGCATGTAAAATGCTTAATGAGAAGTTTGACGGGAATATTGTTGTGAATTATGGGTGACGTGTATGACGTACAGTCTGTTATTTGACGGCAGGTGAGAATGGACTGATGGCGTATCGTGTGGATGATGTTCAGATGGCGGTGCAGAAGGAGGCCAGACTGCTGCTGTTTCAGGGCTCGGAGGGGTTCGACAATCTCAGCTGTCTGGAGAGAGTCACTTCAGCTCAGATCTCCATTACTCTGAGCAAAGTGGAGCAGAACCAGACTATCCCGCATCAGTCCATGCCTCAGACGTGGCACGTGATGTACGCGGACCGCTACACCTGTCAGGAAGGGCAGATCGATGGCGAGCTACAGGACGTCCGCTTCCAGATCACCCTGCTGAACCCCGACGCCGCAGGAAACCCACTGGATCACTTCAGCGCCGAGGAGGCCGGGCTTCACAGTTTCTACTTCCTGCTGATCGTGGCGTATTTCGTGGCGTCGTGTATCTATGTGCAGCCGCTTTGGCAGGCGCTGAGTAAAGGCGGCCCGATGCACACGGTGCTGAAGGTTCTAACCTCCGCGCTGCTGCTGCAGGGAACTTCAGTGCTGCTCAACTACATCCACATGGCCCGCAGGAAGTCTCAGAGTAAACCGCTGCAGTGGGACTCGTCTCCGGCCTCCACTGCGCTCGCGCTGGCCGTCGTCATCGCTCAGGGGGCGCTGCTGATCTGGGAGCAGTTTGAGGAGGCAGAGCACCACAGTTTCCACTCCTCCAGCAGTGTGTCCGGGTGGCTGCTGATGGCGCTGCGTGTGGCGCTCGCTCTGTTTCTGGCATCAGTTCTGTATCAGATCATCTCAGCGGAGCGGAGCGCGCTCAAGCGAGACTTCTACCTCAGCTTCGGCAAGGGCTGTTTCCTGTGGTTCCTGTGTCATCCAGTGCTGGTCCTGTTCTCTGTGATGCTCAATGAACATCAGAAAGAAAAGGTCGTTACGATCGGCGTGATCCTGTGCCAGTCCATCTCAGTGGTGGTTCTGTACCGGCTCTTCCTGTCGCGCAGTCTGTACTGGGAGGTGTCGTCGCTGTCGTCGGTCACGCTCCCGCTCACCATGAGCCGCCGCGGCCGATACTGAGCCGTCAGACGGGAAGCTTCACGCCGGAGCGGCTCATCACGGGTCCGGCGTCGCGTGCGGGAGAGTCACGTGACGACGAGACACAGAGTGAAACTCGCGGTTTACATCATCCAGGGCTCATTCATCATAGTTAATGTGTTCAGTGTGTCTGACACACCTGATGAATGAGCCTCGTTCAACTGTGACGCTGCAAACGAAGGAAAGTTAAAGCTCAGTGTTCGTCTCTGTTCAGCAATAAGAAAATGAAACGTCTCTAATTTCTCAGCGCACACAGACGGGACGCCACTGCATCGTGTGTTTTATTTGTGGTCACACATGATTTCATTTCTGTCATTCCCAATAAGTGCCTAAAATGACAATCATCTGAAGCGGGACGTGTGCAAAACATCACGCTCCTCCTCAGTGTTTCTGCACAAATATTCTTAAATCAACATTTACTGGAGAAGCAAAAAAGTCTTATTTATTAAAGGTTTATGTTTAAAAATAGAACAAATATCCCCCAATGGAGTCAGAAAATTCAAATTAACTCAAAGGGAAATCAAGATTATTTTTGTACATACAAAAACACTGAGGAAGAGTGACATGTTTCGCAGTGTTTGTGTGTCGACTGAATATTAAATCTATGGATATTTATTGATCCTTTTTACTGGATCCTGCACATTTCAGTGTCAGAGGAGAAAGATGTGAAAATAAA

Function

symbol description
gpr180 Orthologous to human GPR180 (G protein-coupled receptor 180).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_19288790_19292748.mRNA True 2351 mRNA 0.50 7 19288096 19293397

Neighbor

gene id symbol gene type direction distance location
CI01000340_19280383_19285904 NA coding downstream 2192 19280228 ~ 19285904 (-)
CI01000340_19267148_19271146 PCK1 coding downstream 16950 19266637 ~ 19271146 (-)
CI01000340_19254583_19259959 ARFRP1, ARFRP1.L, ARFRP coding downstream 28137 19254226 ~ 19259959 (-)
CI01000340_19247600_19253297 STMN3 coding downstream 34799 19247473 ~ 19253297 (-)
CI01000340_19231651_19244239 HELZ2 coding downstream 43132 19230891 ~ 19244964 (-)
CI01000340_19323506_19324456 NA coding upstream 30109 19323506 ~ 19325011 (-)
CI01000340_19326355_19328820 NA coding upstream 32237 19325634 ~ 19329321 (-)
CI01000340_19335733_19340791 NA coding upstream 42257 19335654 ~ 19340791 (-)
CI01000340_19346357_19355278 NA coding upstream 52507 19345904 ~ 19355278 (-)
CI01000340_19382181_19383365 NA coding upstream 88575 19381972 ~ 19383454 (-)
G497444 NA non-coding downstream 119721 19168075 ~ 19168375 (-)
G497442 NA non-coding downstream 121318 19158869 ~ 19166778 (-)
G497440 NA non-coding downstream 132839 19154833 ~ 19155257 (-)
G497393 NA non-coding downstream 200468 19086428 ~ 19087628 (-)
G497288 NA non-coding downstream 321586 18915346 ~ 18966510 (-)
G497343 NA non-coding upstream 12846 19306243 ~ 19363326 (-)
G497375 NA non-coding upstream 122056 19415453 ~ 19420039 (-)
G497341 NA non-coding upstream 135964 19429361 ~ 19431737 (-)
G497350 NA non-coding upstream 155042 19448439 ~ 19451285 (-)
G497351 NA non-coding upstream 198527 19491924 ~ 19494481 (-)
CI01000340_18419431_18419838 NA other downstream 833416 18419058 ~ 18421201 (-)
G496853 NA other downstream 2045357 17177492 ~ 17242739 (-)
G496845 NA other downstream 2242408 17043723 ~ 17045688 (-)
CI01000340_16515291_16518346 TUSC2A, TUSC2 other downstream 2768122 16514899 ~ 16518531 (-)

Expression


Co-expression Network