CI01000340_19323506_19324456


Basic Information

Item Value
gene id CI01000340_19323506_19324456
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 19323506 ~ 19325011 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_19323506_19324456.mRNA
ATCAATCTATGCCAAAAGTGTTTATGAAGTTTAGAGCTACATTATAGTTGTAAAAATACCAGCTATTATTGGTAATAAAAGCATAATAATTTATTGACATTATTTGTTGTATTTATTTTATTTTGTAACTTTTTTTTTGCAGAAAATAATATTTAATAAAAAATATAAAATGTTTCTGTCAGTTATTGTTCTGAAGTAAAAAAAAAAAAACACTAAAGAAAACATTTATGACTCAAAAGCTGAGATTTAAAGACAGGAGAGAACACACACACATTGACACACACACACACACACACACACAAATTGACACACAAGACACAAGTTTTATATATATGTGTGTATATATAACTTCTCATTTCCGGTTTACTTTAATTCGAAGTACTAAAATAATTAAAACTATTAATAAAACTACTAATAAAACTATATAAAAAGTAAAAAATTACAAAAACAACAAAATTACGAAAACTCTAACGATATATATAATTATTTAAAAAATAATAAAAACCATTATAGTATCTAAACGATACTAAAATAACTGCGTTAATATTGACGCGCATGCGCACATCCGTCATTCTTTCCCGCTGTAATGATGGACAATCACAGGTGTCTCTTGTGGAAGCGGATCAGAGCTGCGAGTCTGTGTGTTCTGGTGTGAATCTGAAGGAGAAGATGCTCAGTGTCGTTCACTGTGACATGGAGCAGGTGCACCGCAGCATCGTCAGTCTGGACGCACAGATTCAGGCCGTCCTGCTGGAGAACCTGAGGCTCAGAAACTGCATCGAGGAACAGCAGGAGAAGTCCCGCTCGCAGCTGACGCAGTTCGGCTCGTACCGCAGCGAGATGCAGGAGTACCGGACGGCCGTGTCTGTGCTGGAGAGCCGAGCAGACGTCCATCAGGAGCTGCAGCAGAAGGATCAGGAGGTGCGAGACCTGACAGCCGCGCTGGAGGAGCTGAAGACGGATCTCCAGAACCCAGACGGCAGTGCTGTCCGACAGGCGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_19323506_19324456.mRNA True 1002 mRNA 0.39 2 19323506 19325011

Neighbor

gene id symbol gene type direction distance location
CI01000340_19288790_19292748 GPR180 coding downstream 30109 19288096 ~ 19293397 (-)
CI01000340_19280383_19285904 NA coding downstream 37602 19280228 ~ 19285904 (-)
CI01000340_19267148_19271146 PCK1 coding downstream 52360 19266637 ~ 19271146 (-)
CI01000340_19254583_19259959 ARFRP1, ARFRP1.L, ARFRP coding downstream 63547 19254226 ~ 19259959 (-)
CI01000340_19247600_19253297 STMN3 coding downstream 70209 19247473 ~ 19253297 (-)
CI01000340_19326355_19328820 NA coding upstream 623 19325634 ~ 19329321 (-)
CI01000340_19335733_19340791 NA coding upstream 10643 19335654 ~ 19340791 (-)
CI01000340_19346357_19355278 NA coding upstream 20893 19345904 ~ 19355278 (-)
CI01000340_19382181_19383365 NA coding upstream 56961 19381972 ~ 19383454 (-)
CI01000340_19456344_19458688 NA coding upstream 131020 19456031 ~ 19458688 (-)
G497444 NA non-coding downstream 155131 19168075 ~ 19168375 (-)
G497442 NA non-coding downstream 156728 19158869 ~ 19166778 (-)
G497440 NA non-coding downstream 168249 19154833 ~ 19155257 (-)
G497393 NA non-coding downstream 235878 19086428 ~ 19087628 (-)
G497288 NA non-coding downstream 356996 18915346 ~ 18966510 (-)
G497375 NA non-coding upstream 90442 19415453 ~ 19420039 (-)
G497341 NA non-coding upstream 104350 19429361 ~ 19431737 (-)
G497350 NA non-coding upstream 123428 19448439 ~ 19451285 (-)
G497351 NA non-coding upstream 166913 19491924 ~ 19494481 (-)
G497479 NA non-coding upstream 178790 19503801 ~ 19550929 (-)
CI01000340_18419431_18419838 NA other downstream 868826 18419058 ~ 18421201 (-)
G496853 NA other downstream 2080767 17177492 ~ 17242739 (-)
G496845 NA other downstream 2277818 17043723 ~ 17045688 (-)
CI01000340_16515291_16518346 TUSC2A, TUSC2 other downstream 2803532 16514899 ~ 16518531 (-)

Expression


Co-expression Network