CI01000340_19335733_19340791


Basic Information

Item Value
gene id CI01000340_19335733_19340791
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 19335654 ~ 19340791 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_19335733_19340791.mRNA
GGCTGATTACTGGAAATCCCAGCCGAAGAAGTTCTGTCAGTACTGCAAGTGCTGGATCGCAGATAATAAACCCAGCGTCGAGTTTCACGAGAGAGGAAAGAACCACAAAGAGAATGTGGCGGCCAAAATCGAAGAGATTAAGAAGAAAAGTCTTGCGAAGGCCAAACAGGAGAAGAAGATGTCAAAGGAGTTTGCAGCGATGGAGGAAGCAGCTCTGAAGGCGTATGAGGAGGATCTGAAGAGACTCACGGCTCAGTCAACAGAGTCTCAGTGGGAGAAACCGGACGGGTTCGTAGGCGAGATCTCGTCATCAGCCGTGGGACACACGCAGGATTCGTCAGACGGTGCGTGGATGGAGGCCGTGAGTCCTGATGGATACATGTACTACTACAACACTGAGACCGGCGAATCCAGCTGGGAAAAACCGGATTGCTTCAATCCAGAAGACATTTGCCCTCCTGGTGTTGAATCTCCTCGTGAAGTGACGGGAGCGTCTGAAAACTCTTCTCCCGCTCAGCCTGAGCCTCTGTCTGCAGCAGAAGACTCGTCTGACCCTCCCAAAGACACACCAGAACCAGAACCAGAACCAGACCAAACCAAACAAACCAGTGGCCCGAAGATCAGTTTCAGGAAAAGAAAAGACGAGCCGATCCAAACGTCATCAGACGACGGAGGAGAGAAGAACTCTGATGATGGAGGAAACGGTGAGGAGAAAGAGGAAGACACGAGCGTCACTGTCGCAGTGAAGGAGGTCGTGACACCTGCCAAGAGACCCAGAAAGATCAATCCATACGGAGCCTGGGAAAAAATCCAGCCGGAGGAAGATCCATATGAGAAGGTGGATCTGCAGCTGCCGCAGATGGAAAGCGCCGCTCCGACTCCAGCCGTCATCCCGCCAGAGCCCCAGCCCAGGTTTAAGGAGCGCACCATCACGTCACTGGGGGACGAAGGCAGCGCCGGAGCCACGTTCAAGAAGAGAAAGACTGAGAACGGCAAGTCCAGGAGCCTCCGGCAGAGAGGGAAGGACGAGTAGAAGATTCTCCATGGGACTGAGATCAGCTCTCACTGCAGTCTTTGAGCTTCATCGCTTTAGAATTTTTGTATTTTATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_19335733_19340791.mRNA True 1112 mRNA 0.53 8 19335654 19340791

Neighbor

gene id symbol gene type direction distance location
CI01000340_19326355_19328820 NA coding downstream 6333 19325634 ~ 19329321 (-)
CI01000340_19323506_19324456 NA coding downstream 10643 19323506 ~ 19325011 (-)
CI01000340_19288790_19292748 GPR180 coding downstream 42257 19288096 ~ 19293397 (-)
CI01000340_19280383_19285904 NA coding downstream 49750 19280228 ~ 19285904 (-)
CI01000340_19267148_19271146 PCK1 coding downstream 64508 19266637 ~ 19271146 (-)
CI01000340_19346357_19355278 NA coding upstream 5113 19345904 ~ 19355278 (-)
CI01000340_19382181_19383365 NA coding upstream 41181 19381972 ~ 19383454 (-)
CI01000340_19456344_19458688 NA coding upstream 115240 19456031 ~ 19458688 (-)
CI01000340_19512374_19526344 NA coding upstream 169730 19510521 ~ 19526344 (-)
G497444 NA non-coding downstream 167279 19168075 ~ 19168375 (-)
G497442 NA non-coding downstream 168876 19158869 ~ 19166778 (-)
G497440 NA non-coding downstream 180397 19154833 ~ 19155257 (-)
G497393 NA non-coding downstream 248026 19086428 ~ 19087628 (-)
G497288 NA non-coding downstream 369144 18915346 ~ 18966510 (-)
G497375 NA non-coding upstream 74662 19415453 ~ 19420039 (-)
G497341 NA non-coding upstream 88570 19429361 ~ 19431737 (-)
G497350 NA non-coding upstream 107648 19448439 ~ 19451285 (-)
G497351 NA non-coding upstream 151133 19491924 ~ 19494481 (-)
G497479 NA non-coding upstream 163010 19503801 ~ 19550929 (-)
CI01000340_18419431_18419838 NA other downstream 880974 18419058 ~ 18421201 (-)
G496853 NA other downstream 2092915 17177492 ~ 17242739 (-)
G496845 NA other downstream 2289966 17043723 ~ 17045688 (-)
CI01000340_16515291_16518346 TUSC2A, TUSC2 other downstream 2815680 16514899 ~ 16518531 (-)

Expression


Co-expression Network