CI01000340_19512374_19526344


Basic Information

Item Value
gene id CI01000340_19512374_19526344
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 19510521 ~ 19526344 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_19512374_19526344.mRNA
TGGAATTGAGTTCGGCTCTGCCCGTGCGGGTTCCTCCTGCCGCCATCCCCATGGACCTGCGCGTGGAAGCATCTCCGGCTCTGGATTCGACGCGCCGTGAGCAGCAGCTGCAGCAGGAGCTTCTGGCGCTCAAACACAAGCAGCAGGTGCAGCGGCAGCTCCTCATCGCTGAGTTCCAGCGGCAGCACGAACAGCTCTCACGGCAACATGAGGCCCAGCTACAGGAGCACATGAAGCATCAGCAGGAGCTTCTGGCCCTCAAGCATCAGCAGGAGCTTCTGGAGCATCAGAGGAAGATGGAGCAGCACCGTCTGGAGCAGGAGCTGGAGAAACAGCAGCGCGAGCAGAAGCTTCAGCTCCTCAAGAACAAAGAGCGCGGACAGGAGAGTGCAGTGGCCAGTACTGAGGTGAAGATGCGCCTGCAGGAGTTCGTTCTGAATAAAAAGAAAGCGCTCGCTCAGCGCAGTCTCAACCACTGCATCTCCAATAACCCGTGCTACTGGAAAACTCAGCACAGTTCTTTAGATCAGAGCTCCCCTCCTCAAACCACCGCTAGTAACTACAACCACCCTGCCATGGGCGTCTACGACTCCAAAGACTTTCCACTGCGCAAAACAGCGTCTGAGCCTAACCTGAAGTTGCGTTCTCGGCTGAAGCAGAAGGTGTCGGAGCGCAGGAGCAGCCCGTTACTGCGCCGCAAAGACAGTCCCATCAGTGCGCTCAAGAAACGCTCTCTGGACATGACAGATTCGTCATGTAGCAGCGCTCCTGCTTCAGGACCCAGTTCCCCAAACAACAGCTCTCACGCAAACCTGTGCGAAAACGGCATCAGTGCGACCGAGGTGACGTCTACCCAGCCAGACAGTGAACGTTTGTCCGTGACTGGTTTACCCATAAGCACTCCATTCCTGGCCTCCTCTCACCTTCCGTCATTCCTTAGCAATTCAGACACTGCAAACTCCCACAATGCACTGCTGCAGCACATGGTCCTTCTGGAGCAGTCAGCCCCACCGAGTCCTTTAGCCGCAGGTATGGCATCGGCTGCGCTGCAGTCTCCGTGCCTGCAGAAGCTGCGGCAGCACCGACCGCTCGGACGCACGCAGTCGGCTCCTCTGCCTCAGAGCAGTCAGGCGCTCCAGCAGCTGGTCGTCCAACAGCAGCACCAGCAGTTCCTGGAGAAACACAAGCAGCACTTCCAGCAGCTTCACATCAACAAGATGTTGAGTAAACCGAGTGATCGGCAGCACCAGAGTCACCCAGAAGAGACGGAGGAAGAGCTGCGAGAGCAGCAGGACGCCACACAGACGGAAACACTTCTCATGAACGTCTCCATTAAACAGGAACCTCCTGATCTCACAGAGGAGCAGAGACAGGAGGAGACAGAGCTGCTCTTCAAACAGCAGGCCCTTCTATTGGAGCAGCAGAGGATCCATCAGCTCAGAAACTACCAGGCATCAATGGAGGCGGCTGGTCTGGTGTACGACTCTCTCATGCAAAAGCACCAGTGCATGTGTGGAAACACCAACACGCATCCCGAACACGCCGGGCGCATCCAGAGCATCTGGTCTCGGCTGCAGGAGACGGGTCTGCGCAGCCAGTGTGAGTGTATCCGTGGAAGAAAAGCCACATTAGAGGAACTGCAGACGGTTCATTCTGAAGCCCATGTCATGTTGTATGGGACCAACCCACTACGGCAGAAACTGGACAGTTCGGTCATATCCATGTTCGTCAGGTTGCCGTGTGGCGGTATTGGGGTGGACAGTGACACTGTCTGGAATGAAGTCCACTCGTCGAGCGCAGCGCGTCTGGCTGCCGGTTCTGTGGTCGAACTCGTCTTCAAAGTGGCATCAGGAGAGCTGAAGAACGGCTTCGCTGTGGTTCGGCCTCCAGGACATCACGCGGAGGAGAGCACGCCAATGGGCTTCTGTTACTTTAACTCTGTTGCCATAGCAGCGAAACTCCTACAGCAAAGACTCAATGTCAGCAAAATTCTGATTGTTGATTGGGACGTTCATCACGGCAACGGAACTCAGCAAGCATTCTACAACGATCCCAGCGTTCTGTACATTTCGCTTCATCGATACGACGATGGCAATTTCTTCCCGGGCAGTGGCGCTCCTGAAGAGGTGGGAAGTGGTCCGGGAGTCGGTTTCAATGTCAATGTGGCGTTTACTGGAGGTCTGGAACCACCGATGGGCGACCCAGAATATCTCGCTGCCTTCAGGACGGTAGTTATGCCGATCGCTAACGAGTTTGCTCCAGATGTGGTGCTGGTGTCGGCAGGGTTTGATGCTGTGGAGGGACATCCGCCGCCGCTGGGAGGTTATAAACTCACCTCCAAATGTTTAGGTTACCTGACCAAGCAGCTGATGGGATTGGCTGGAGGTCGCGTGGTCCTGGCGCTGGAGGGAGGTCACGACCTCAGGGCCATATGTGACGCCTCAGAGGCATGCGTCTCAGCGCTTCTGGGAATAGAGCTGGAGCCATTTCCAGCAGACGTCCTGAAGCAGAGACCCAATGAGAACGCGGTCCAATCCATAGAGAAAGTCCTAGAAAGTCACAGTAAGTACTGGAGGTCCGTCCAGCGGTCCGTGTCCGGCGTCGGCCTGTCTCTGCTGGAAGCTCAGAGGGGCGATTCTGAAGAGAATGAGACGGTGACAGCGATGGCTTCTTTATCTGTGGCGGTCATGGAGAAAAGAACGGAGGATGAACCCATGGAAGAGGAGCCGCCGATGTAGGGGACGCGAGTTTTACCAAACCTTCGAGCTCTTCTGGGTCTCGTGTGACGGAGGCTCTCGCTGAGGCCGGCGTCGAGCAGCAGGAGAGCAGAGAGAGTCGTCAGGGCACAAAGGCTAACTCATCATGTTAGCGCTGTAGCCCGCTAGCACTGTGGCCCCAATGCTACGCGTTCAAGCTGAAGTCACTTGAGATGTTTGTTTTTGGAGATTTCTGTCTTATTGGCTCAATATGTCGCAGATGTCGAGGGCCGTTTAAATCAGCCAGCAGATCATTCTGACAGAAGGATGGGTGGAAAACAAGGATCCAAGGAACCCACCACAGGCTCTGGAACACGCTGTTTGTTTAGCACTAAATGAGATGTACGTCTCCACCACAAGCACTACAGTGATTCACCACACGGTGGCGCCGTGACTCGTCTGTGCCACTTTACTGAAGCTTCTGTGAGAGGGAGTGCTTTTGTTGAGACCATGTGGAACTACGAATGAATTCTGAGGAACGTTGTCTTAAGTCAGTAATGTCATGAACACATTATCCACAATTCCAGTGGGATGATGTTTGGAGGAGAGAACACCTTTTTCAGCATGTTTACTTGGACAGCGGTGTTCACGCTTCAGTTCTAAACACTTTTTCTAGCGATGACTCTCTTTGTTTGTTGTTCGATGAGCTGTACAAACGCTGCTGTAAGTGACGCCTCAGAACTTCCTGTTTCTAGTGATGCTTTAACGCCAGTGGCTCAACGTCACACAATGGAGCTGCGTATAAAGCAGCTGAAGGCAGGCGTTGGTTTTTCAGAGTGGTTTATTGACCTGCATGTGCATTACAGGAAAAAGCTACAAAACAACTGGAATGAAATGGAGAACAGAATTTCTGACCAAAGCATGAGTTTGCATCTTGTCTTGCACCTTTTTCTACACAGTCTTGAAAAGTGAGGTGTTCGACACAGATTACAAGACCACAGTATGTTAAATGGTTTTGCCTCTGTGCTCAAACTCATTCCATTGGATTTACATGGAAAAAAACATCCAGACTAGAGACTATCATGTACCAAATCAGCTTGTGTTCGTAACCTCTTCAGCTCTCCAAACAAACCGTTGCAACTTTGGTAATGTTGGAAACCCCCAAGCATGCGGCGGGATTGGTACCTACAAGATCAATACAATATGCATGTGAAATGTTAATTTTATTTGCCTTCCAGAGCGTCGCTCTCAAACGAACCTTGAGCCGTGTCTCTCACAACAGTTTCACCCCCAAAAGAATCGAGTTGGTTCGTCTTACTTGGCAACTTGTCAACTGTTAAAACGCTCAGTTTTTTTTAGTTCAGTTACTGGTTATTTTTTAGGTTTTAGAAATTAATTCCATTCCTGTCATTCCTGCTTTGTACAGTTTTTCTTTATTCAGAATATTTGTATTTTCACTTGACTGTTGCTTGTTATTATTTGTGCTAGTGGATTTTAGTTCCATGCATTACTTTGGTACCATGTACTTTGAGCTACATGATGAACACTTTTTGACCGGTTCATGGGTTTTCAAGCATTATCACAAAGACTGATTGTGTACTTCTGTGTTCTGTTCACAGTAGATTTGTATATGAAAGGAAATCTAAATATATGAATATGAAGAACTGACATTCACCTGTGTTTGTGTGCATGGATGTAATATTTTGTAAGCAGCACATGCTGGTCTCAAATATACAAAACCTTGTTTTTTTAGGATGGTTTAAGAGTGTATAACAGTCAGCTGTCAGTGGAACTAACCTGGCAAATGCACTTGGTTGATGGTCAGTGATTCATTCATTCATTGTTTTTTTTTATTTTAGATGAGATGGTATGTCTATGACAGTAATTGAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_19512374_19526344.mRNA True 4591 mRNA 0.50 23 19510521 19526344

Neighbor

gene id symbol gene type direction distance location
CI01000340_19456344_19458688 NA coding downstream 51833 19456031 ~ 19458688 (-)
CI01000340_19382181_19383365 NA coding downstream 127067 19381972 ~ 19383454 (-)
CI01000340_19346357_19355278 NA coding downstream 155243 19345904 ~ 19355278 (-)
CI01000340_19335733_19340791 NA coding downstream 169730 19335654 ~ 19340791 (-)
CI01000340_19326355_19328820 NA coding downstream 181200 19325634 ~ 19329321 (-)
G497351 NA non-coding downstream 16040 19491924 ~ 19494481 (-)
G497350 NA non-coding downstream 59236 19448439 ~ 19451285 (-)
G497341 NA non-coding downstream 78784 19429361 ~ 19431737 (-)
G497375 NA non-coding downstream 90482 19415453 ~ 19420039 (-)
G497343 NA non-coding downstream 147195 19306243 ~ 19363326 (-)
G497480 NA non-coding upstream 16463 19542807 ~ 19543826 (-)
G497442 NA other downstream 346049 19158869 ~ 19166778 (-)
CI01000340_18419431_18419838 NA other downstream 1055841 18419058 ~ 18421201 (-)
G496853 NA other downstream 2267782 17177492 ~ 17242739 (-)
G496845 NA other downstream 2464833 17043723 ~ 17045688 (-)
CI01000340_16515291_16518346 TUSC2A, TUSC2 other downstream 2990547 16514899 ~ 16518531 (-)

Expression


Co-expression Network