G485381


Basic Information

Item Value
gene id G485381
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 43982 ~ 44181 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU556981
TTTTTCAGTAGGCTAAATAAACTGCTTTGGCTGTATAATTGTCTAATAACACTGTATTTAAACATTTTTGAAGATTAAACATTTTTTTATAGTGAGCTAATTGGCCTGAATTAAGTGGCAAAAAGATTTCCATATACATTTGTTTTGCTTAACCTATTCAAGTATTTGATTCTAAAAAGAATGTGTGTTTGTGTGTAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU556981 True 200 lncRNA 0.27 1 43982 44181

Neighbor

gene id symbol gene type direction distance location
CI01000340_00174722_00176216 MCHR1A coding downstream 129554 173735 ~ 176504 (+)
CI01000340_00312480_00313262 NA coding downstream 268031 312212 ~ 313534 (+)
CI01000340_00330446_00342078 STX8 coding downstream 286265 330446 ~ 342078 (+)
CI01000340_00488669_00506008 NA coding downstream 444488 488669 ~ 506802 (+)
CI01000340_00529527_00543895 NA coding downstream 485346 529527 ~ 544508 (+)
G485367 NA non-coding upstream 16027 24577 ~ 27955 (+)
G485387 NA non-coding downstream 6292 50473 ~ 50747 (+)
G485371 NA non-coding downstream 13669 57850 ~ 58387 (+)
G485391 NA non-coding downstream 35395 79576 ~ 80081 (+)
G485400 NA non-coding downstream 48115 92296 ~ 93213 (+)
G485414 NA non-coding downstream 86183 130364 ~ 130640 (+)
G485373 NA other downstream 62704 106885 ~ 113769 (+)
G485427 NA other downstream 119105 163286 ~ 167634 (+)
CI01000340_02930635_02933799 LSM2 other downstream 2885910 2930635 ~ 2933935 (+)
G487133 NA other downstream 3929734 3973915 ~ 3982545 (+)

Expression


Co-expression Network