G485371


Basic Information

Item Value
gene id G485371
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 57850 ~ 58387 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU556969
GATTTTATTGCATTTTACAAATCCAAAATTTGGGGTTGTAAACAATTTTCACTCTGAAATTGCTTGTCAGCGTCACAAATAATTACAAAGAAACGACAATTAACAAATTGAATTGAACTGTTGCATCATGTTTTTTTTTAAAAATGCTTCACACTTGAACTATTTTGAATTCTTGACTTTATATGCCTCACCTGATGTTCACAATTAATGAAAAGCATGTCTCACACTCTAAGAAGGCTACAGAAAAGAAAAATAGTACACACTAAACATGGATAAACTCAAATATGAAGTAATGGGTCTTTGAAAGCTTTACTAATTGAAATAGAGAGTAACACAACTTAAACTTCTTATTAATCCACAGGTATTTATCAAAGTTGCTTGGTACTGATAGTCAGTTTTGGTGAATGTCTGTACATTAGGCGTGTCCAAATTTTCTCCATTTCATCTCATTATAAGTCTGAGGGTGGATTTGATCGTGTGTATTTCCTGTTCCCCCAACACCCTTTCACCTGAGGATGACAAATAGAAGTGATTCATT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU556969 True 538 lncRNA 0.33 1 57850 58387

Neighbor

gene id symbol gene type direction distance location
CI01000340_00174722_00176216 MCHR1A coding downstream 115348 173735 ~ 176504 (+)
CI01000340_00312480_00313262 NA coding downstream 253825 312212 ~ 313534 (+)
CI01000340_00330446_00342078 STX8 coding downstream 272059 330446 ~ 342078 (+)
CI01000340_00488669_00506008 NA coding downstream 430282 488669 ~ 506802 (+)
CI01000340_00529527_00543895 NA coding downstream 471140 529527 ~ 544508 (+)
G485387 NA non-coding upstream 7103 50473 ~ 50747 (+)
G485381 NA non-coding upstream 13669 43982 ~ 44181 (+)
G485367 NA non-coding upstream 29895 24577 ~ 27955 (+)
G485391 NA non-coding downstream 21189 79576 ~ 80081 (+)
G485400 NA non-coding downstream 33909 92296 ~ 93213 (+)
G485414 NA non-coding downstream 71977 130364 ~ 130640 (+)
G485374 NA non-coding downstream 91193 149580 ~ 150229 (+)
G485433 NA non-coding downstream 124840 183227 ~ 183465 (+)
G485373 NA other downstream 48498 106885 ~ 113769 (+)
G485427 NA other downstream 104899 163286 ~ 167634 (+)
CI01000340_02930635_02933799 LSM2 other downstream 2871704 2930635 ~ 2933935 (+)
G487133 NA other downstream 3915528 3973915 ~ 3982545 (+)

Expression


Co-expression Network