G485427


Basic Information

Item Value
gene id G485427
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 163286 ~ 167634 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU557027
GGAAAATCCCAAATTCAGTATCTCAGAAAATTAGAATATTGTGAAAAGGTTCAATATTGAAGACACCTGGTGCCACACTCTAATCAGCTAATTAACTCAAAACACCTGCAAAGGCCTTTAAATGGTCTCTCAGTCTAGTTCTGTAGGCTACACAATCATGGGGAAGACTGCTGACTCGACAGTTGTCCAAAAGACGACCATTGACACCTTGCACAAGGAGGGCAAGACACAAAAGGTCATTGCAAAAGAGGCTGGCTGTTCACAGAGCTCTGTGTCCAAGCACATTAATAGAAAGGCGAAAGGAAGGAAAAGATGTGGTAGAAAAAAGTGTACAAGCAATAGGGATAACCGCACCCTGGAGAGGATTGTGAAACAAAACCCATTCAAAAATGTGGGGGAGATTCACAAAGAGTGGACTGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU557027 True 422 TUCP 0.43 2 163286 167634

Neighbor

gene id symbol gene type direction distance location
CI01000340_00174722_00176216 MCHR1A coding downstream 6101 173735 ~ 176504 (+)
CI01000340_00312480_00313262 NA coding downstream 144578 312212 ~ 313534 (+)
CI01000340_00330446_00342078 STX8 coding downstream 162812 330446 ~ 342078 (+)
CI01000340_00488669_00506008 NA coding downstream 321035 488669 ~ 506802 (+)
CI01000340_00529527_00543895 NA coding downstream 361893 529527 ~ 544508 (+)
G485374 NA non-coding upstream 13057 149580 ~ 150229 (+)
G485414 NA non-coding upstream 32646 130364 ~ 130640 (+)
G485400 NA non-coding upstream 70073 92296 ~ 93213 (+)
G485391 NA non-coding upstream 83205 79576 ~ 80081 (+)
G485371 NA non-coding upstream 104899 57850 ~ 58387 (+)
G485433 NA non-coding downstream 15593 183227 ~ 183465 (+)
G485437 NA non-coding downstream 24008 191642 ~ 191932 (+)
G485438 NA non-coding downstream 25185 192819 ~ 244815 (+)
G485443 NA non-coding downstream 53122 220756 ~ 221282 (+)
G485441 NA non-coding downstream 58589 226223 ~ 242659 (+)
G485373 NA other upstream 49517 106885 ~ 113769 (+)
CI01000340_02930635_02933799 LSM2 other downstream 2762457 2930635 ~ 2933935 (+)
G487133 NA other downstream 3806281 3973915 ~ 3982545 (+)
CI01000340_04399692_04401164 NA other downstream 4231785 4399419 ~ 4401496 (+)
CI01000340_04660938_04668996 NA other downstream 4496675 4659584 ~ 4669322 (+)

Expression


Co-expression Network