G485433


Basic Information

Item Value
gene id G485433
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 183227 ~ 183465 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU557036
GGCTTTTCACACTGCATTTAAGCCCGGGTTATCGTCGTTCTAAACACCACTTTGTATATTAACGTGCTTTTGACAGTCACAGAAACACTGTGCATTGTATATAAATAGAAAATTCAGCGTTGGAAAGAAAAAACAACAAATGCTGACAGAAAATGCAACAATTGCAGTGCAGAAAATACTGTTTAATTCTTTTATAGTCTGAAATGTCCATTCAGGATAAACTTGATAGTGAAGTTGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU557036 True 239 lncRNA 0.36 1 183227 183465

Neighbor

gene id symbol gene type direction distance location
CI01000340_00174722_00176216 MCHR1A coding upstream 6723 173735 ~ 176504 (+)
CI01000340_00312480_00313262 NA coding downstream 128747 312212 ~ 313534 (+)
CI01000340_00330446_00342078 STX8 coding downstream 146981 330446 ~ 342078 (+)
CI01000340_00488669_00506008 NA coding downstream 305204 488669 ~ 506802 (+)
CI01000340_00529527_00543895 NA coding downstream 346062 529527 ~ 544508 (+)
CI01000340_00559281_00560682 NA coding downstream 374559 558024 ~ 560682 (+)
G485374 NA non-coding upstream 32998 149580 ~ 150229 (+)
G485414 NA non-coding upstream 52587 130364 ~ 130640 (+)
G485400 NA non-coding upstream 90014 92296 ~ 93213 (+)
G485391 NA non-coding upstream 103146 79576 ~ 80081 (+)
G485371 NA non-coding upstream 124840 57850 ~ 58387 (+)
G485437 NA non-coding downstream 8177 191642 ~ 191932 (+)
G485438 NA non-coding downstream 9354 192819 ~ 244815 (+)
G485443 NA non-coding downstream 37291 220756 ~ 221282 (+)
G485441 NA non-coding downstream 42758 226223 ~ 242659 (+)
G485511 NA non-coding downstream 114552 298017 ~ 298440 (+)
G485427 NA other upstream 15593 163286 ~ 167634 (+)
G485373 NA other upstream 69458 106885 ~ 113769 (+)
CI01000340_02930635_02933799 LSM2 other downstream 2746626 2930635 ~ 2933935 (+)
G487133 NA other downstream 3790450 3973915 ~ 3982545 (+)
CI01000340_04399692_04401164 NA other downstream 4215954 4399419 ~ 4401496 (+)
CI01000340_04660938_04668996 NA other downstream 4480844 4659584 ~ 4669322 (+)

Expression


Co-expression Network