G485511


Basic Information

Item Value
gene id G485511
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 298017 ~ 298440 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU557136
TTATATCAACAACAACAAGTTCATTGGATAGTCTGAACTGTGCCATGGTGTAGGCTATACCAATGAACTGTCACAATGTAAAGCATGGCATAATTTTGACTTGTTAATACTGACATGCAGTGTTGGGGAAAGTTACTTTTAAAAGTAATGCATTACAATATTGCGTTACTCCCCAAAAAAGTAACTAATTGCGTTACTTAGTTACTTTTTATGAAAAGTAATGTGTTACGTTACTTTTGCGTTACTTTTTCTCACCTGGGCTGGGCTTGCTTGTTTGTTTTTTAATAACAACAACAAAAAAGTTCTATTTTTGGCAAATGTAAAGGCCCTTTCACACCAAAAGTGAAATGGCTAAGCCTCAAGGGGGTCGCACACCGGACAAGAAGCTCAGCGCCGCGCCGCGTCTCGGACAACTCACAGGTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU557136 True 424 lncRNA 0.39 1 298017 298440

Neighbor

gene id symbol gene type direction distance location
CI01000340_00174722_00176216 MCHR1A coding upstream 121513 173735 ~ 176504 (+)
CI01000340_00312480_00313262 NA coding downstream 13772 312212 ~ 313534 (+)
CI01000340_00330446_00342078 STX8 coding downstream 32006 330446 ~ 342078 (+)
CI01000340_00488669_00506008 NA coding downstream 190229 488669 ~ 506802 (+)
CI01000340_00529527_00543895 NA coding downstream 231087 529527 ~ 544508 (+)
CI01000340_00559281_00560682 NA coding downstream 259584 558024 ~ 560682 (+)
G485438 NA non-coding upstream 53202 192819 ~ 244815 (+)
G485441 NA non-coding upstream 55358 226223 ~ 242659 (+)
G485443 NA non-coding upstream 76735 220756 ~ 221282 (+)
G485437 NA non-coding upstream 106085 191642 ~ 191932 (+)
G485433 NA non-coding upstream 114552 183227 ~ 183465 (+)
G485520 NA non-coding downstream 26919 325359 ~ 325695 (+)
G485551 NA non-coding downstream 178189 476629 ~ 476865 (+)
G485564 NA non-coding downstream 273267 571707 ~ 572179 (+)
G485614 NA non-coding downstream 380727 679167 ~ 679379 (+)
G485600 NA non-coding downstream 381883 680323 ~ 681788 (+)
G485427 NA other upstream 130383 163286 ~ 167634 (+)
G485373 NA other upstream 184248 106885 ~ 113769 (+)
CI01000340_02930635_02933799 LSM2 other downstream 2631651 2930635 ~ 2933935 (+)
G487133 NA other downstream 3675475 3973915 ~ 3982545 (+)
CI01000340_04399692_04401164 NA other downstream 4100979 4399419 ~ 4401496 (+)
CI01000340_04660938_04668996 NA other downstream 4365869 4659584 ~ 4669322 (+)

Expression


Co-expression Network