G485786


Basic Information

Item Value
gene id G485786
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 325334 ~ 325716 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU557449
GGGACAGGTAGCAATAAGAGGCCGGAAAAGTTAAATGTACATATAAGGAACAGCTGGAGGACCAATTTGCAACTTATTAGGTCAATTGGCAACATGATTGGGTATAAAAAGAGCCTCTCAGAGTGGCAGTGTCTCTCAGAAGTCAAGATGGGCAGAGGATCACCAATTCCCCCAATGCTGTGGCGAAAAATAGTGGAGCAATATCAGAAAGGAGTTTCTCAGAGAAAAATTGCAAAGAGTTTGAAGTTATCATCATCTACAGTGCATAATATCATCCAAAGATTCAGAGAATCTGGAACAATCTCTGTGCGTAAGGGTCAAGGCCGGAAAACCATACTGGATGCCCGTGATCTTCAGGCCCTTAGACGGCACTGCATCACATA
>TU557450
CTGGAGGACCAATTTGCAACTTATTAGGTCAATTGGCAACATGATTGGGTATAAAAAGAGCCTCTCAGAGTGGCAGTGTCTCTCAGAAGTCAAGATGGGCAGAGGATCACCAATTCCCCCAATGCTGTGGCGAAAAATAGTGGAGCAATATCAGAAAGGAGTTTCTCAGAGAAAAATTGCAAAGAGTTTGAAGTTATCATCATCTACAGTGCATAATATCATCCAAAGATTCAGAGAATCTGGAACAATCTCTGTGCGTAAGGGTCAAGGCCGGAAAACCATACTGGATGCCCGTGATCTTCAGGCCCTTAGACGGCACTGCATCACATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU557449 False 383 TUCP 0.44 1 325334 325716
TU557450 True 330 TUCP 0.44 1 325334 325663

Neighbor

gene id symbol gene type direction distance location
CI01000340_00320527_00323526 NA coding downstream 1324 320143 ~ 324010 (-)
CI01000340_00300171_00311362 CFAP52 coding downstream 13316 299895 ~ 312018 (-)
CI01000340_00197972_00296049 USP43A coding downstream 29285 197972 ~ 296049 (-)
CI01000340_00151447_00155343 GRB2A, GRB2B, GRB2, GRB2.S coding downstream 169991 150535 ~ 155343 (-)
CI01000340_00145063_00147754 MIF4GDA coding downstream 176236 144526 ~ 149098 (-)
CI01000340_00399009_00473643 NTN1B, NTN1.L, NTN1A, UNC-6, NTN1 coding upstream 73293 399009 ~ 473643 (-)
CI01000340_00641314_00671233 SEC16B coding upstream 315577 641293 ~ 671233 (-)
CI01000340_00683967_00684845 GBG12, GNG12, GNG12.L, GNG12A coding upstream 357078 682794 ~ 684865 (-)
CI01000340_00739436_00741531 DR1 coding upstream 412689 738405 ~ 741637 (-)
CI01000340_00750353_00755174 RDH8 coding upstream 424423 750139 ~ 755174 (-)
G485775 NA non-coding downstream 183885 141211 ~ 141449 (-)
G485745 NA non-coding downstream 206966 60185 ~ 118368 (-)
G485771 NA non-coding downstream 211438 106885 ~ 113896 (-)
G485744 NA non-coding downstream 265291 57883 ~ 60043 (-)
G485753 NA non-coding downstream 277270 47552 ~ 48064 (-)
G485796 NA non-coding upstream 25640 351356 ~ 351724 (-)
G485852 NA non-coding upstream 153709 479425 ~ 480779 (-)
G485805 NA non-coding upstream 170961 496677 ~ 499007 (-)
G485800 NA non-coding upstream 248680 574396 ~ 676396 (-)
CI01000340_00062787_00080635 NA other downstream 243239 62780 ~ 82095 (-)
CI01000340_00787534_00791061 NA other upstream 460835 786551 ~ 791409 (-)
G487884 NA other upstream 1570085 1895801 ~ 1902272 (-)
G488782 NA other upstream 3680089 4005805 ~ 4006448 (-)
G488862 NA other upstream 4181480 4507196 ~ 4518120 (-)
CI01000340_04598932_04627160 NA other upstream 4274504 4598714 ~ 4627447 (-)

Expression


Co-expression Network