G485551


Basic Information

Item Value
gene id G485551
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 476629 ~ 476865 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU557178
GATTTCTGGCTTCCATTTGAGGAAGTTCAAGGTCAGAAAGCATAGCCTATTCAACATAAGGTTTTACTGGTTTTGATAAGTTGTACCAATTTTTCATTTTTCTTTTTTTTTTTTCATTAATGTTATTCATACAACACCAGTCCACTGGAATCTACAAACACATTTTAGGCTACTTTCTGTTTATTGGTCTGCTAAGCGGTTGGACCACTAGATGGCAGTATTTCATTTCCACTAAGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU557178 True 237 lncRNA 0.35 1 476629 476865

Neighbor

gene id symbol gene type direction distance location
CI01000340_00330446_00342078 STX8 coding upstream 134551 330446 ~ 342078 (+)
CI01000340_00312480_00313262 NA coding upstream 163095 312212 ~ 313534 (+)
CI01000340_00174722_00176216 MCHR1A coding upstream 300125 173735 ~ 176504 (+)
CI01000340_00488669_00506008 NA coding downstream 11804 488669 ~ 506802 (+)
CI01000340_00529527_00543895 NA coding downstream 52662 529527 ~ 544508 (+)
CI01000340_00559281_00560682 NA coding downstream 81159 558024 ~ 560682 (+)
CI01000340_00575085_00576868 GLULB, GLULA, GLNA, GS02, GLUL, GS01, GS04 coding downstream 97595 574460 ~ 577456 (+)
CI01000340_00630670_00634136 NA coding downstream 153682 630547 ~ 634231 (+)
G485520 NA non-coding upstream 150934 325359 ~ 325695 (+)
G485511 NA non-coding upstream 178189 298017 ~ 298440 (+)
G485438 NA non-coding upstream 231814 192819 ~ 244815 (+)
G485441 NA non-coding upstream 233970 226223 ~ 242659 (+)
G485443 NA non-coding upstream 255347 220756 ~ 221282 (+)
G485564 NA non-coding downstream 94842 571707 ~ 572179 (+)
G485614 NA non-coding downstream 202302 679167 ~ 679379 (+)
G485600 NA non-coding downstream 203458 680323 ~ 681788 (+)
G485616 NA non-coding downstream 205104 681969 ~ 682218 (+)
G485618 NA non-coding downstream 205838 682703 ~ 682992 (+)
G485427 NA other upstream 308995 163286 ~ 167634 (+)
G485373 NA other upstream 362860 106885 ~ 113769 (+)
CI01000340_02930635_02933799 LSM2 other downstream 2453226 2930635 ~ 2933935 (+)
G487133 NA other downstream 3497050 3973915 ~ 3982545 (+)
CI01000340_04399692_04401164 NA other downstream 3922554 4399419 ~ 4401496 (+)
CI01000340_04660938_04668996 NA other downstream 4187444 4659584 ~ 4669322 (+)
G489634 NA other downstream 6217356 6694221 ~ 6700788 (+)

Expression


Co-expression Network