Gene
RNA
| Item | Value |
|---|---|
| gene id | G485564 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 571707 ~ 572179 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU557195 | False | 425 | lncRNA | 0.35 | 1 | 571707 | 572131 |
| TU557196 | False | 473 | lncRNA | 0.35 | 1 | 571707 | 572179 |
| TU557193 | False | 314 | lncRNA | 0.38 | 1 | 571818 | 572131 |
| TU557194 | True | 362 | lncRNA | 0.38 | 1 | 571818 | 572179 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_00559281_00560682 | NA | coding | upstream | 11025 | 558024 ~ 560682 (+) |
| CI01000340_00529527_00543895 | NA | coding | upstream | 27199 | 529527 ~ 544508 (+) |
| CI01000340_00488669_00506008 | NA | coding | upstream | 64905 | 488669 ~ 506802 (+) |
| CI01000340_00330446_00342078 | STX8 | coding | upstream | 229629 | 330446 ~ 342078 (+) |
| CI01000340_00312480_00313262 | NA | coding | upstream | 258173 | 312212 ~ 313534 (+) |
| CI01000340_00575085_00576868 | GLULB, GLULA, GLNA, GS02, GLUL, GS01, GS04 | coding | downstream | 2281 | 574460 ~ 577456 (+) |
| CI01000340_00630670_00634136 | NA | coding | downstream | 58368 | 630547 ~ 634231 (+) |
| CI01000340_00672283_00673853 | GADD45AB, GADD45A | coding | downstream | 100104 | 672283 ~ 674492 (+) |
| CI01000340_00710056_00726924 | NA | coding | downstream | 137651 | 709830 ~ 727495 (+) |
| CI01000340_00883803_00902915 | NA | coding | downstream | 311222 | 883401 ~ 903402 (+) |
| G485551 | NA | non-coding | upstream | 94842 | 476629 ~ 476865 (+) |
| G485520 | NA | non-coding | upstream | 246012 | 325359 ~ 325695 (+) |
| G485511 | NA | non-coding | upstream | 273267 | 298017 ~ 298440 (+) |
| G485438 | NA | non-coding | upstream | 326892 | 192819 ~ 244815 (+) |
| G485614 | NA | non-coding | downstream | 106988 | 679167 ~ 679379 (+) |
| G485600 | NA | non-coding | downstream | 108144 | 680323 ~ 681788 (+) |
| G485616 | NA | non-coding | downstream | 109790 | 681969 ~ 682218 (+) |
| G485618 | NA | non-coding | downstream | 110524 | 682703 ~ 682992 (+) |
| G485654 | NA | non-coding | downstream | 173092 | 745271 ~ 745493 (+) |
| G485427 | NA | other | upstream | 404073 | 163286 ~ 167634 (+) |
| G485373 | NA | other | upstream | 457938 | 106885 ~ 113769 (+) |
| CI01000340_02930635_02933799 | LSM2 | other | downstream | 2357912 | 2930635 ~ 2933935 (+) |
| G487133 | NA | other | downstream | 3401736 | 3973915 ~ 3982545 (+) |
| CI01000340_04399692_04401164 | NA | other | downstream | 3827240 | 4399419 ~ 4401496 (+) |
| CI01000340_04660938_04668996 | NA | other | downstream | 4092130 | 4659584 ~ 4669322 (+) |
| G489634 | NA | other | downstream | 6122042 | 6694221 ~ 6700788 (+) |
