Gene
RNA
| Item | Value |
|---|---|
| gene id | G485888 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 688022 ~ 689024 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU557570 | True | 982 | lncRNA | 0.40 | 2 | 688022 | 689024 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_00683967_00684845 | GBG12, GNG12, GNG12.L, GNG12A | coding | downstream | 3177 | 682794 ~ 684865 (-) |
| CI01000340_00641314_00671233 | SEC16B | coding | downstream | 16789 | 641293 ~ 671233 (-) |
| CI01000340_00399009_00473643 | NTN1B, NTN1.L, NTN1A, UNC-6, NTN1 | coding | downstream | 214379 | 399009 ~ 473643 (-) |
| CI01000340_00320527_00323526 | NA | coding | downstream | 364012 | 320143 ~ 324010 (-) |
| CI01000340_00300171_00311362 | CFAP52 | coding | downstream | 376004 | 299895 ~ 312018 (-) |
| CI01000340_00739436_00741531 | DR1 | coding | upstream | 49381 | 738405 ~ 741637 (-) |
| CI01000340_00750353_00755174 | RDH8 | coding | upstream | 61115 | 750139 ~ 755174 (-) |
| CI01000340_00764259_00771823 | SCINLA | coding | upstream | 74688 | 763712 ~ 773298 (-) |
| CI01000340_00787534_00791061 | NA | coding | upstream | 98148 | 786551 ~ 791409 (-) |
| CI01000340_00798980_00828835 | NA | coding | upstream | 109956 | 798980 ~ 828835 (-) |
| G485800 | NA | non-coding | downstream | 11626 | 574396 ~ 676396 (-) |
| G485805 | NA | non-coding | downstream | 189015 | 496677 ~ 499007 (-) |
| G485852 | NA | non-coding | downstream | 207243 | 479425 ~ 480779 (-) |
| G485796 | NA | non-coding | downstream | 336298 | 351356 ~ 351724 (-) |
| G485775 | NA | non-coding | downstream | 546573 | 141211 ~ 141449 (-) |
| G485954 | NA | non-coding | upstream | 242577 | 931601 ~ 932122 (-) |
| G485962 | NA | non-coding | upstream | 253383 | 942407 ~ 943669 (-) |
| G485986 | NA | non-coding | upstream | 289164 | 978188 ~ 978858 (-) |
| G485947 | NA | non-coding | upstream | 296949 | 985973 ~ 1011769 (-) |
| G485951 | NA | non-coding | upstream | 298202 | 987226 ~ 988409 (-) |
| G485786 | NA | other | downstream | 362306 | 325334 ~ 325716 (-) |
| CI01000340_00062787_00080635 | NA | other | downstream | 605927 | 62780 ~ 82095 (-) |
| G487884 | NA | other | upstream | 1206777 | 1895801 ~ 1902272 (-) |
| G488782 | NA | other | upstream | 3316781 | 4005805 ~ 4006448 (-) |
| G488862 | NA | other | upstream | 3818172 | 4507196 ~ 4518120 (-) |
| CI01000340_04598932_04627160 | NA | other | upstream | 3911196 | 4598714 ~ 4627447 (-) |
